Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3284 ATGGCTTGTGCAAATTTGGCATTGCATTTTCGAATTCTCATCATGTCAGTGATGATTTTTGCAGCTACTTTCTGTGTTGGAGACACTGACCCCCTTGATGTTGCAGCAATCAATAGCTTATATGTAGCACTAGGATCACCTCCCCTTCAAGGGTGGAAACCTACAGGAGGAGATCCATGTGTGGAACAGTGGCAAGGTGTCAGCTGTGTCTTCTCCAATATAACTGCTTTACAACTTGGAAGCATGAATTTGAGTGGACAGCTTGGAAGTAATTTGGATTTTCCATCCATCATAGAAATGGATATTAGCAACAACAGCATTGGAGGGACCATTCCATCCACTCTGCCATCTACTTTGAAGAGATTGTCTCTTTCGGAGAATAAGTTAAATGGAAGCATTCCGGATGCCTTATCCATGTTAATTCAACTAACAGAATTGAATCTGTCAGGTAACAACTTGAGTGGTCAGCTACCTCCCTCGATTGTGAATTTATCATCTCTTACTACATTACACTTGCAGAACAATCAACTTGGTGGAACCCTTTTTGTTTTGGAGGACCTCCCTCTTCAGAATCTGAATATAGAGAACAATCTATTCTCTGGGCCGATTCCTCCAAAGTTGTTGACTATTCCTGAATTCAGAAAAGATGGGAATCCCTTTAATACTACTATTATTCACTCACCTCCAGCTGCAGCTCCTTCACCTGAAGCCATGGTTCCTTCTCCTTCCCCTACTCCTTCCACTGAAAAGTCACATGGTAAAGGGGCAAAAAGTCCCTCAATGACCATGAAAGCTCCAACACCTTTGATTACTAGGAGTTCCTTTGAAGTTAAGAACATGGTTTGGTGGATTGCTGGTTTTGGGATCATAATATTTATTGCGTTAGGAATTTGCCTTTTTATGTGTTGGTACTGTAAGAGAAGACCAAGGAGCAAGAATTATGAGGAACATAAAGACATGGATGTTTATATTGATGAGGAGAAAGGACAGGGCTCAAAACTTCCACCGCTGCAACAAGCACTGCCACATCCTCTCCCAATAATTTCTGGAGAGAATTTCATCAGTCCAGCTAAATCCACCAAAGTAATTGAAGGTGGAAAACAAATTATAACCAGTTCCATCAGGGTTTATTCTGTTGCATTGCTTCAGCAGTACACAGATAGTTTTTCACAAGAAAACTATATAGGAGAAGGCACACTTGGCCCTCTTTATAAGGGTGAGCTCCCTGATGGAAAGTTGCTGGCTGTGAGGAAGCTGAATGCTTCCATGGTGCAGAATCATGAGCAGTTTCTTCAATTAGTATTCAGTATCTCCAAAATTCAACATCCAAACATTGTAAAACTTTTAGGCTACTGCACCGAGCACAGCCAATGGCTACTTGTGTATGAGTATTGCAGCAATGGAACCCTTCATGATGCATTGCATACTGATGATAACACTCGCGTTAAACTTTCATGGAACGAAAGAATCCAGGTGTCACTCGGAGCTGCTAGAGCTTTACAGTATCTGCATGAGAACTTCCAGCCACCTGTTGTGCAGCGAAATTTTCGATCTTCTAACGTTCTCCTGAATGACAAGATGGAAGTGTGTGTCTCTGACTGTGGATTAGGTTCTTTACTATCTTCAGAGCAGGTCGTGACGGCTCAGGGCTATGATGCTCCAGAGTTTGAATCAGGGAGTTATACACAAAAGAGTGATGTATTCAGTTTTGGAGTTGTGATGCTAGAACTCCTAACCGGGCGAAAAGCCTTTGACAGGTGGCGGCCTCGGGGAGAGCAATCTGTGGTGAGATGGGCAGTGCCTCAGCTGCATGACATTGATGCATTGTCTGAAATGGTAGATCCCTCCTTGAACGGAGCCTACCCTCCTCCTCCTATGAAATCCTTGTCACGTTTTGCTGATGTTATTTCTTCATGTTTACAGCATGAACCTGAATTCCGACCTGCAATGTCTGAAATCGTTCAAGATCTCTTGCGAATCACGTCAAGTCTTGGATGA 1998 0.4284 MACANLALHFRILIMSVMIFAATFCVGDTDPLDVAAINSLYVALGSPPLQGWKPTGGDPCVEQWQGVSCVFSNITALQLGSMNLSGQLGSNLDFPSIIEMDISNNSIGGTIPSTLPSTLKRLSLSENKLNGSIPDALSMLIQLTELNLSGNNLSGQLPPSIVNLSSLTTLHLQNNQLGGTLFVLEDLPLQNLNIENNLFSGPIPPKLLTIPEFRKDGNPFNTTIIHSPPAAAPSPEAMVPSPSPTPSTEKSHGKGAKSPSMTMKAPTPLITRSSFEVKNMVWWIAGFGIIIFIALGICLFMCWYCKRRPRSKNYEEHKDMDVYIDEEKGQGSKLPPLQQALPHPLPIISGENFISPAKSTKVIEGGKQIITSSIRVYSVALLQQYTDSFSQENYIGEGTLGPLYKGELPDGKLLAVRKLNASMVQNHEQFLQLVFSISKIQHPNIVKLLGYCTEHSQWLLVYEYCSNGTLHDALHTDDNTRVKLSWNERIQVSLGAARALQYLHENFQPPVVQRNFRSSNVLLNDKMEVCVSDCGLGSLLSSEQVVTAQGYDAPEFESGSYTQKSDVFSFGVVMLELLTGRKAFDRWRPRGEQSVVRWAVPQLHDIDALSEMVDPSLNGAYPPPPMKSLSRFADVISSCLQHEPEFRPAMSEIVQDLLRITSSLG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3284 665 Gene3D Ribonuclease Inhibitor 35 229 IPR032675 -
Ahy13g3284 665 Pfam Protein tyrosine and serine/threonine kinase 392 657 IPR001245 GO:0004672|GO:0006468
Ahy13g3284 665 SUPERFAMILY L domain-like 32 207 - -
Ahy13g3284 665 Gene3D Transferase(Phosphotransferase) domain 1 465 664 - -
Ahy13g3284 665 ProSiteProfiles Protein kinase domain profile. 389 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3284 665 PANTHER LEUCINE RICH REPEAT KINASE 2 355 660 - -
Ahy13g3284 665 PANTHER LEUCINE RICH REPEAT KINASE 2 9 148 - -
Ahy13g3284 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 140 320 - -
Ahy13g3284 665 Gene3D Phosphorylase Kinase; domain 1 354 464 - -
Ahy13g3284 665 MobiDBLite consensus disorder prediction 225 265 - -
Ahy13g3284 665 PANTHER LEUCINE RICH REPEAT KINASE 2 140 320 - -
Ahy13g3284 665 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Ahy13g3284 665 SUPERFAMILY Protein kinase-like (PK-like) 370 657 IPR011009 -
Ahy13g3284 665 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Ahy13g3284 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 355 660 - -
Ahy13g3284 665 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 9 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3284 Ahy-Chr13 129698843 129703036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3284 12 652 Strubbelig Receptor Gene Family AT1G53730 40.029 5.73e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ahy13g3284 PK_Tyr_Ser-Thr 8.50E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3284 - - gmx:100794130 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3284 13 129698843 129703036 Ahy3g3019 3 127098239 127102415 hybridization
Ahy13g3284 13 129698843 129703036 Ahy20g0505 20 5202397 5211477 PCT
Ahy13g3284 13 129698843 129703036 Ahy10g0320 10 2967680 2973301 PCT
Ahy20g0505 20 5202397 5211477 Ahy13g3284 13 129698843 129703036 PCT
Ahy10g0320 10 2967680 2973301 Ahy13g3284 13 129698843 129703036 PCT