Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3261 ATGGCTTCATGGCATATTCATGTACCATCTCTCCTGTCGATAATTTTCTTTCTCCAAATGGCCCCTTTTGCAAACCCACTTTCATTTAACTTCACAAGCTTTAAGGATGGTGATGTTAATGTAGAAGAAGATGCTGCTGTTGTAAGAGAAGCTATCCAAATCACCTTGAACAGCATGGACCAAAACAACAACTACAGCGTTGGCCGTGTCACCAGCAAATCACTGATTCAGCTTTGGGACAAGAATTCTGGTCAGCTCACTGACTTCATTACCACATTTTCCTTTGTTATTTACTCACAAAAGTCTAGTTATGGAGATGGAATGGCTTTCTTCTTGGCTGATCCAAATCTCCCACTTCTGCATCATGTTACACAAGGTGGTGGCCTTGGCCTTGTAGATGGCAACAGAGTACTGAATTCAACTCAGCATTCATTCGTCGCCTTGGAGTTTGACACCTTCCACAATCCATGGGACCCTCAAGGTAATCATGTAGGCTTGAATTTCAACTCCATGAAATCTAATATAAGTAAGACATGGTTGGTGGATATTATGAAATGGAGAGTATATAATTGTAGCATTAAGTACAATTCAACCACTCTTAATTTAAGCGTTTCGTTCACTCAGTACACTGATAATTCTTCATCAGAGGATTATGTCTCATACAAGGTTGATCTGAGAGACCACTTGCCGGAGCACGTTATTGTTGGCTTCTCTGCTGCTACAGGGAGGTTGTTTGAGGTGAATACTCTCAAGTCTTGGTCATTCAGTTCAAGTTTGGATATTCTTGAGAATGTCAGAAATCCGATGACAGCACCGGCAGCATCACCAACTCCTAGTCCTGATTCTGAAAAGGGGAACAAGTTAAGACTGTTGGTGGGGATTGGAATTGGTGCAGCCTTGATTCTTAGTTTGTTAGTTTGCGCTTTAATATTGTGGAAGAAAAGTAGAGGGAAAAAAGAGGACTTAACTTTTGATCTGACCATGGATGATGAATTCCAAAAAGGCTCTGGACCAAAGAGGTTTGGCTACAATGAACTTCGAAGTGCAACTAACAAATTTTCAGATCCGAATAAGCTTGGTCAAGGTGGTTTTGGCAGCGTGTACAAAGGTTATCTGAAGAACTCAAACACCAATGTTGCCATCAAGAAGATTTCAAGAGAGTCTAGCCAAGGGATAAAGGAATATGCAACTGAAGTGAAGATCATTAGCCAACTGAGACATAGAAATCTAGTACAACTCATAGGTTGGTGCCACAGGAAGAATGATCTACTCCTCATATATGAGTTCATGCCAAATGGAAGCTTAGATTCACATTTATATGGCGGAAAAAGCCTCTTGACTTGGCCAACAAGGTACAACATAGCTCTGAGCCTGGCTTCAGCATTGCTTTACCTACAAGAAGAATGGGAACAATGTGTGATTCACAGGGACATCAAACCAAGCAACATAATGTTGGATTCATGCTTCAATGCAAAGCTTGGTGATTTCGGTCTGGCAAGGCTAGTGGATCATGAGAAAGGTTCAAGAACCACGCTAATCGCAGGAACAAGAGGCTACATTGCACCAGAATATGCTACTTCAGGAAAGGCTACCAAAGAAGCTGATATATACAGCTTTGGAGTTGTGCTATTGGAGATTGCAAGTGGAAAGAAACCAATTATTGGGCTAGATTCCAACAAGGAGGACATAATAACTGTTGTTGAGTGGGTCTGGGAGCTATATGGAATGGGAAAGTTGCTTGAAGCAGTGGACCCAAAGCTATGTGGAGAATTTGATGAGAATCAAATGGAGAGCGTGCTTGGAGTTGGACTTTGGTGTGTTCATCCAGATTACAAATTCAGGCCATGCATGAGGCAAGTCATCCAAGTTCTTCAATTTGAGGCTCCTTTACCAATTCTCCCAGAAAAGATGCCAGTGCCAACATATCTTCCTCCAGATATAAGAGCAATCTTTCGTTCAATTTCACCTCATTTTGCAATTGACACAACGGAATATTGCATGGGTGACTAG 2010 0.4159 MASWHIHVPSLLSIIFFLQMAPFANPLSFNFTSFKDGDVNVEEDAAVVREAIQITLNSMDQNNNYSVGRVTSKSLIQLWDKNSGQLTDFITTFSFVIYSQKSSYGDGMAFFLADPNLPLLHHVTQGGGLGLVDGNRVLNSTQHSFVALEFDTFHNPWDPQGNHVGLNFNSMKSNISKTWLVDIMKWRVYNCSIKYNSTTLNLSVSFTQYTDNSSSEDYVSYKVDLRDHLPEHVIVGFSAATGRLFEVNTLKSWSFSSSLDILENVRNPMTAPAASPTPSPDSEKGNKLRLLVGIGIGAALILSLLVCALILWKKSRGKKEDLTFDLTMDDEFQKGSGPKRFGYNELRSATNKFSDPNKLGQGGFGSVYKGYLKNSNTNVAIKKISRESSQGIKEYATEVKIISQLRHRNLVQLIGWCHRKNDLLLIYEFMPNGSLDSHLYGGKSLLTWPTRYNIALSLASALLYLQEEWEQCVIHRDIKPSNIMLDSCFNAKLGDFGLARLVDHEKGSRTTLIAGTRGYIAPEYATSGKATKEADIYSFGVVLLEIASGKKPIIGLDSNKEDIITVVEWVWELYGMGKLLEAVDPKLCGEFDENQMESVLGVGLWCVHPDYKFRPCMRQVIQVLQFEAPLPILPEKMPVPTYLPPDIRAIFRSISPHFAIDTTEYCMGD* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3261 669 Pfam Protein kinase domain 356 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3261 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 259 IPR013320 -
Ahy13g3261 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Ahy13g3261 669 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3261 669 Gene3D - 25 267 - -
Ahy13g3261 669 PANTHER - 17 658 - -
Ahy13g3261 669 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Ahy13g3261 669 PANTHER L-TYPE LECTIN-DOMAIN RECEPTOR KINASE 17 658 - -
Ahy13g3261 669 CDD STKc_IRAK 359 625 - -
Ahy13g3261 669 SUPERFAMILY Protein kinase-like (PK-like) 337 647 IPR011009 -
Ahy13g3261 669 CDD lectin_legume_LecRK_Arcelin_ConA 27 259 IPR001220 GO:0030246
Ahy13g3261 669 Pfam Legume lectin domain 27 264 IPR001220 GO:0030246
Ahy13g3261 669 ProSiteProfiles Protein kinase domain profile. 353 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3261 669 Gene3D Transferase(Phosphotransferase) domain 1 430 644 - -
Ahy13g3261 669 ProSitePatterns Protein kinases ATP-binding region signature. 359 383 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3261 Ahy-Chr13 129389915 129392104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3261 17 642 Receptor kinase-like Gene Family AT5G10530 45.997 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3261 Pkinase 4.50E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3261 - - gmx:100780181 908.286