Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3260 ATGGTTAATTGTAATCTCCATTTTGTTGTGCTGCTTGTAATAGTAATAATAATGCATGTTGCAAATGCTCAGATACGATCTTTTAACTTCAATAAAAACTTCAACCCAGCTCAATCTCCTGAACTAAACCCAGATGGAGATGCAACTTACTCACAGTCTTTTGATCATATCCAACTCACAGGAAAAACAGATAATGCCAAGGGATTAGGAAGAATCACAACCAAGCCTATGCATCTTATGAAAAACAATTCAGAACAAAGATATGACTTCACTACCAACTTTACCTTTGTTGTTATCTCAAACAAGACCTACCATGGAGAAGGTTTGGCATTCTTCATAGCAAGCCATATGCTGCCAATTAAGAAACATGGTATGAACGGTGGAGGGCTTGGTCTTGTGGAACCTTGTCACCCTCACCCAGATGAGTACTCTTTTGTGGCTGTGGAGTTTGACACTAAGTCAGATCCTTGGGACCCAATAGGCCCAGAGCCACATGTGGGAATAGATGTCAATTCTATGATTTCCACCAAGCACAGCAAATGGCCTGCAGATTTCTCAGACATAACCAATGTTTACAACTGCAGTGTCGTATACAGCGCCGGAAGCAGGCGTCTCGACGTTTACTTCACCGGAGGATCCTTCAATGGCCCTGTACCAAAAAACCTTTCAAGCCACTTGGATCTCACTGATTACTTAAATGATCCTGTTACTCTTGGCATTTCAGCTTCAACACAGAATTATACTGTTCAATTTAGACTGCTTTCATGGTCATTCATTGCAAAGTTATCGACACCAAGTAATGCTGGTGATGACAACAGAAAACGGGAGAAATTGAAGCAAGGACTAGAAATTGGCACTGCTTGGTTTTTGAGTTTGTTAGTGTTGGTCCTGGTCTTGGATTTCATACGCAAGAGAGGAAGAAGAAAACATGAACTCGATCCTATGGATCATGAATTCCAAACTGGACCTCAGAGGATCAGTTACAACATATTGGTGTCTGCCACAAATAACTTTGAAGAGGCGAAGAAGCTCGGAAAAGGTGGCTTTGGTGGTGTTTATAAAGGATATTTCAAAGATACAGACTCTTATGCTGCTGTAAAGAAGATATCAGCAGATTCAAGGCAAGGGATAAAGGAATATGCAGCTGAAGTGAAGATCATCAGCCAATTGAGACACAGGAATTTGGTTAGACTTACTGGTTGGTGTCACAAGAAGAATGACTTCATCCTGATATATGAGTACATGCCAAATGGAAGCTTGGATTCTTGTCTTTTCGACGGCGTAGGCTTCTTGTCTTGGCAAGTAAGGTACAGCATAGCTTTGGGATTGGCATCAGCATTGCTGTATTTGCAAGAAGGGTGGGAACAATGTGTGCTTCACAGGGACATTAAATCAAGCAACATAATGTTGGACTCAGATTTCAATGCTAAGCTTGGGGATTTTGGATTGGCCAGGCTTGTGGATCATGAGAAAGGTTCAAGGACCACAGTGACTGCTGGCACACTTGGTTACATAGCACCAGAATACATGAAAACAGGAAAAGTTGGGAAGGAATCTGATATATACAGTTTTGGGGTGGTTTTGTTGGAGATAGCATGCGGCAAAAAGGCTATTCATCACATAGAGATGGAGGGTTGTGTGACTCAAGTTTCATTGGTAGAGTGGGTTTGGGAGCTGTATGGGTTGAGAAGCATCACAGCAGCAGCAGATCCAAATCTATGTGTTGCATTTGATGTTCAACAAATGGAATGTATGCTTGTTGTTGGTCTTTGGTGTGCTCATCCAGATTGCAAATGCAGGCCTTCTATAAGGCAAGTGTTGAAGGTTCTTAACTTTGATGCTCCTTTACCTATTCTTCCACAAAGGATGCCTATTCTACCACCCTATCTTCCTCTATCAACAAATGAGGTCTTTTTTACTGCTATATGA 1929 0.4158 MVNCNLHFVVLLVIVIIMHVANAQIRSFNFNKNFNPAQSPELNPDGDATYSQSFDHIQLTGKTDNAKGLGRITTKPMHLMKNNSEQRYDFTTNFTFVVISNKTYHGEGLAFFIASHMLPIKKHGMNGGGLGLVEPCHPHPDEYSFVAVEFDTKSDPWDPIGPEPHVGIDVNSMISTKHSKWPADFSDITNVYNCSVVYSAGSRRLDVYFTGGSFNGPVPKNLSSHLDLTDYLNDPVTLGISASTQNYTVQFRLLSWSFIAKLSTPSNAGDDNRKREKLKQGLEIGTAWFLSLLVLVLVLDFIRKRGRRKHELDPMDHEFQTGPQRISYNILVSATNNFEEAKKLGKGGFGGVYKGYFKDTDSYAAVKKISADSRQGIKEYAAEVKIISQLRHRNLVRLTGWCHKKNDFILIYEYMPNGSLDSCLFDGVGFLSWQVRYSIALGLASALLYLQEGWEQCVLHRDIKSSNIMLDSDFNAKLGDFGLARLVDHEKGSRTTVTAGTLGYIAPEYMKTGKVGKESDIYSFGVVLLEIACGKKAIHHIEMEGCVTQVSLVEWVWELYGLRSITAAADPNLCVAFDVQQMECMLVVGLWCAHPDCKCRPSIRQVLKVLNFDAPLPILPQRMPILPPYLPLSTNEVFFTAI* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3260 642 ProSitePatterns Protein kinases ATP-binding region signature. 344 368 IPR017441 GO:0005524
Ahy13g3260 642 CDD lectin_legume_LecRK_Arcelin_ConA 27 258 IPR001220 GO:0030246
Ahy13g3260 642 Gene3D - 25 264 - -
Ahy13g3260 642 SUPERFAMILY Protein kinase-like (PK-like) 320 630 IPR011009 -
Ahy13g3260 642 Gene3D Transferase(Phosphotransferase) domain 1 415 625 - -
Ahy13g3260 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Ahy13g3260 642 CDD STKc_IRAK 352 611 - -
Ahy13g3260 642 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 264 IPR013320 -
Ahy13g3260 642 Pfam Protein kinase domain 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3260 642 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Ahy13g3260 642 PANTHER LECTIN RECEPTOR KINASE 22 640 - -
Ahy13g3260 642 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Ahy13g3260 642 SMART serkin_6 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3260 642 ProSiteProfiles Protein kinase domain profile. 338 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3260 642 PANTHER - 22 640 - -
Ahy13g3260 642 Pfam Legume lectin domain 27 266 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3260 Ahy-Chr13 129386838 129388932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3260 1 625 Receptor kinase-like Gene Family AT5G10530 42.212 9.36e-161 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3260 Pkinase 1.10E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3260 - - cam:101492002 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3260 13 129386838 129388932 Ahy3g2918 3 125497478 125504804 hybridization