Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3256 ATGGGATCCACGTTGATTAATAATACTACAACCGTTATTCGTCAACGTCAACGCCGTATAGCTATTAACAGTTTTGATCCCAACAACAAGGACATAGTGTATGAGCAATCTGCATCACCAGTGACACCATCAATCCAACTCACAAGAAACCGGCAAGACGCTACCCAGGGTAGCAGCACTGGTCGTGCCACTTACTACCAACCCATGCACCTGTGGGACAAAGCTTCAAGGAATCTCACACACTTCACAACCCATTTCTCCTTCATCATTGATTCCCAGAATCGAACTAACTATGCAGATGGCTTCGCATTCTTTCTTGCCCCTAACGGCTCGAAGCTCCCGAATGCGGGGGGAGGCACCTTGGGTCTCGTACCGAATAACCAGACACTCAACGCAACTGAAAACCCCTTTGTGGCTGTGGAGTTTGATATCTTCTCAAATGTTGAATGGGATCCACCAGCAGAACATGTCGGCATTGACATCAACTCAATGAGGTCTGCAGCTAACGTCACATGGTTCGCTGCGGATAGCATCAAGCAAGGGAAGCTCAATCAGGCTTGGATCAGTTACGATGCTACTTCCCTCAATCTGAGTGTCACCTTCACTGGCTCTAGCAATGGCACCACACTGCTGCAACATCTATCTGCCATAGTGGACTTGAGAACTTATCTTCCGGAATATGTTACCTTTGGGTTCTCAGGTGCCACGGGAACTTCATTTGCTATACATCAAATTCTTTCATGGGATTTCAACTCGACTTTGCAAGAACTACAAGTCATTGCAAATCCCCCAGCAATGACTCCAAGCTACCCACCTGTAGTTACCGAAAAGAAGAAAGGGGCCAACAACACAGGACTAGCAGTGGGATTGGCTATGGGCGGGGTGGTTGTGGTTTTGGGTTTGGGCTTGGTTTCGTTTAAATTGTGGAAGAAAGGAAGTGATGATGAAGAGGAAGATGATCAAGATTTTGAGGAGCATATGGGGGACGATTTTGGAAGGGGAACCGGGCCTAAGAGGTATTCATATGCTGAATTAGCACGTGCAGCGGATAATTTCAAAGATGAGAACGAGCTTGGTCAGGGTGGATTTGGAGGTGTCTATAGAGGGTACCTTAAAGATATCAACTCGTACGTTGCTATCAAGAGGATATCAGAACATTCTCATCAAGGAATAAAGGAATTCGCGTCGGAAGTAAAGATCATTAGCCGGCTTAGGCACCGAAATCTTGTCCAACTGATTGGTTGGTGTCCGAAAAGGAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGCTTAGATGTTCATCTTTTCAACAAGCAGAATCTGCTGAGATGGACAGTTAGATACAACATAGCTCGAGGCTTGGCGGCCGCACTGCTATACTTGCACGAAGAATGGGAACAATGTGTTGTGCATAGGGACATCAAATCAAGCAACATCATGCTGGATTCAGAGTTCAATGCCAAACTTGGGGATTTTGGGCTAGCAAGGCTTGTTGACCATGCAAAAGGCGCGCAAACCACGGCTCTAGCCGGTACTCTGGGCTACATGGCTCCCGAATGCAATACCACATTCAGGGCTACTAAAGAATCAGATGTGTACAGTTTTGGAGTTGTGGCATTGGAGATAGCGTGTGGAAGGAAACCCATCAAATATAATGCTCCGGAAAGGGAAATCAATATTGTAGAATGGGTGTGGGGTCTCTATGGAAGTGGAAGAATTCTTGAAGCAGCGGATGAAAGGCTAGATGGAGATTTTGTGGAGGAACAAATGAAATGCTTGATGGTTGTTGGGCTGTGGTGTGCTCACCCTGATCATAGAAGCAGGCCTTCAATGAGGCAAGCAATTCAAGTGCTTAACTTTGAAGCTCCATTACCCACTCTTCCATTGAGTTTGCCTGTCCCTACCTATGTTCACTCGTCTTCTAATTTAGCTCCATTCAGCATAGACAATTCTTCAGGGGATGTCCAATACCAGACCATGAGCTCCACCTCAAACTCAAACACAACCTCCTCCGGTGTCACCACAACTTCTGATGATGTATCTCCCTCTAAGTCACTTCTACACTCGCGGCAACATACATTAATGAAGTAA 2100 0.4605 MGSTLINNTTTVIRQRQRRIAINSFDPNNKDIVYEQSASPVTPSIQLTRNRQDATQGSSTGRATYYQPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYADGFAFFLAPNGSKLPNAGGGTLGLVPNNQTLNATENPFVAVEFDIFSNVEWDPPAEHVGIDINSMRSAANVTWFAADSIKQGKLNQAWISYDATSLNLSVTFTGSSNGTTLLQHLSAIVDLRTYLPEYVTFGFSGATGTSFAIHQILSWDFNSTLQELQVIANPPAMTPSYPPVVTEKKKGANNTGLAVGLAMGGVVVVLGLGLVSFKLWKKGSDDEEEDDQDFEEHMGDDFGRGTGPKRYSYAELARAADNFKDENELGQGGFGGVYRGYLKDINSYVAIKRISEHSHQGIKEFASEVKIISRLRHRNLVQLIGWCPKRKKLLLVYEYMPNGSLDVHLFNKQNLLRWTVRYNIARGLAAALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTLGYMAPECNTTFRATKESDVYSFGVVALEIACGRKPIKYNAPEREINIVEWVWGLYGSGRILEAADERLDGDFVEEQMKCLMVVGLWCAHPDHRSRPSMRQAIQVLNFEAPLPTLPLSLPVPTYVHSSSNLAPFSIDNSSGDVQYQTMSSTSNSNTTSSGVTTTSDDVSPSKSLLHSRQHTLMK* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3256 699 CDD STKc_IRAK 358 622 - -
Ahy13g3256 699 PANTHER - 22 688 - -
Ahy13g3256 699 Gene3D - 19 263 - -
Ahy13g3256 699 Pfam Protein kinase domain 352 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3256 699 ProSiteProfiles Protein kinase domain profile. 352 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3256 699 Pfam Legume lectin domain 22 258 IPR001220 GO:0030246
Ahy13g3256 699 PANTHER RECEPTOR LECTIN KINASE 22 688 - -
Ahy13g3256 699 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 256 IPR013320 -
Ahy13g3256 699 CDD lectin_legume_LecRK_Arcelin_ConA 23 254 IPR001220 GO:0030246
Ahy13g3256 699 Gene3D Phosphorylase Kinase; domain 1 337 428 - -
Ahy13g3256 699 SMART serkin_6 352 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3256 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Ahy13g3256 699 SUPERFAMILY Protein kinase-like (PK-like) 336 652 IPR011009 -
Ahy13g3256 699 Gene3D Transferase(Phosphotransferase) domain 1 429 641 - -
Ahy13g3256 699 MobiDBLite consensus disorder prediction 657 699 - -
Ahy13g3256 699 MobiDBLite consensus disorder prediction 314 335 - -
Ahy13g3256 699 ProSitePatterns Protein kinases ATP-binding region signature. 358 381 IPR017441 GO:0005524
Ahy13g3256 699 ProSitePatterns Legume lectins alpha-chain signature. 224 233 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3256 Ahy-Chr13 129362218 129364793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3256 22 639 Receptor kinase-like Gene Family AT5G10530 47.059 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3256 Pkinase 9.20E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3256 - - gmx:100782344 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3256 13 129362218 129364793 Ahy3g2919 3 125517126 125520191 hybridization