Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3255 ATGGCAGCATCTCATCAACACTACTGTGATAACAAAAGTTATCTTCTTTCTTGTTTCACCTTATTCTTTCTAGCTGTAGCATCAAGTGCAGCTCCAATAGCATTCAACTACAAGACATTTAGAAACATGGGAAACACCTTAAATCTTACAGGAGGAGATGCCTCTCTGGACATTAATAATGGAGCACTCAACCTTACTTATTATGGGACTGATAGCCTTGGCAGAGTCAAATATCACAAACTGCTGCATCTTTGGGACAAGAAAACAAGCAAGGCCACAGATTTCACCACACACTTCACCTTCTCCATCAATACACCAAACAAAACCTACAATTCGGATGGCATCACTTTCTATCTTGCTCAGCCCAACTTTCCTCTTCCAACTCCAAGATTTGGCGGCGGCATTGGTCTCCTGTCACGTGCTCAGATGCTTACTCCAAACTACACAAGCAAAGATCATTTTGTGGCAGTAGAATTTGACACCTTTGGCAATGTCGAATGGGATCCCATTCTTGGATATGATCATGTAGGTGTTGATATTAATAGTATGGCCACTCCTTACACTCGAGAATGGTTCACTAGCCAGGATGAGAGAAAATATGATGTTGATATCACTTATAATGCTACTTCAAATGTTCTGGCTGTGTTTTTCACTGGATACAAAGATAACATCACAAGGATTAAGCAGCAATTATCCGCTGATGTGGATCTGAGAGAGAAACCACCAGAATGGGTTGAATTTGGCTTCTCTTCCGCAACCGGTATGTATTATGAGTATCATACTCTTTTCTCGTGGTCCTTCAACTCTACTATGAACTTGGACTTGGACTTGGAAGCACACAGCAGGGACAATAATGAAAGAGCAACACACAAGGACAACAAGGGTAATCAAACAAAAACCGGAACAATCATAGGGGTTACTATTGGTGCATGTGCTTTAATTGGTGTTTTTGGGCTAGCTTTTCTTATGGGATGGAAGCTGAGGAGGAAAAGAGGAGTGGAGAATGTAATTAACCTTGCAATGGACAGAGATTTTGAGAGAAGCACTGGACCAAGGAGGTTTTCCTATGCAGAACTTTCTAGAGCAACTTATAACTTTGCAAATGAGCATAAAATTGGTAAGGGGGGTTTTGGGGAAGTCTACAGAGGATTTTTGAGAGACCTTAACATGCATGTTGCCATCAAGAGGATATCTCAGGGATCTCAACAAGGTGTGAGGGAGTATGCATCTGAAGTCAAGATCATTAGTCAACTGAGGCATAGGAATTTGGTTCAACTCGTTGGTTGGTGTCATGAGCAGAATGAGCTTCTACTGGTTTATGAGTTTGAGGAAAATGGAAGTTTAGATTCTTATCTGTTCAAAGGTGGGGGGTTATTAAAATGGGAAGTAAGATACAACATTGCTAGAGGCTTGGCTTCAGCTTTATTTTACTTGCATGAAGAGTGGGAGCAGTGCGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATTCCAATTTCAATGCAAAGCTTGGAGATTTTGGGTTAGCCAGATTGATGGACCATGAAGCAAGTTCGAAAACAACGAATTTAGCAGGAACATTTGGTTACTTGTCACCGGAAGCTGCAACGAGAGGGAAGACTAGTAAAGAGTCAGATGTATACAGTTATGGAATTGTTGCATTGGAGATAGCATGTGGAAGAAGGGTGGTTGAACAAAATGTGAATGAAGAGCAGATATACTTGGTGGATTGGGTTTGGGAACTGTATGGCAAAGGTGATATACTTAAAGCAGCAGATCCAGGATTAGAGTTGGGAGCATTTGAGGAAGAGGAAATGAAGAGGCTAATGACAGTTGGGCTTTGGTGTACTCACAGTGATTACCTTAAAAGGCCATCAATGAGACAAACACTTCAAGTACTCTATTTTGAAGTTCCATTGCCAAATCTCCCATCACAGGGTACTGATGCACCTAACTCTGTCAGATCTTTGCTTCCTGAGAATAATAGCCAAACACAGCCTTCAACTTCTTCAAGCAGTAGCACCTTCACTGTTGGGTCTACACACTCCAACAATAAGGCTTCTTCTCAACCTCTACGTACATTCTAA 2094 0.415 MAASHQHYCDNKSYLLSCFTLFFLAVASSAAPIAFNYKTFRNMGNTLNLTGGDASLDINNGALNLTYYGTDSLGRVKYHKLLHLWDKKTSKATDFTTHFTFSINTPNKTYNSDGITFYLAQPNFPLPTPRFGGGIGLLSRAQMLTPNYTSKDHFVAVEFDTFGNVEWDPILGYDHVGVDINSMATPYTREWFTSQDERKYDVDITYNATSNVLAVFFTGYKDNITRIKQQLSADVDLREKPPEWVEFGFSSATGMYYEYHTLFSWSFNSTMNLDLDLEAHSRDNNERATHKDNKGNQTKTGTIIGVTIGACALIGVFGLAFLMGWKLRRKRGVENVINLAMDRDFERSTGPRRFSYAELSRATYNFANEHKIGKGGFGEVYRGFLRDLNMHVAIKRISQGSQQGVREYASEVKIISQLRHRNLVQLVGWCHEQNELLLVYEFEENGSLDSYLFKGGGLLKWEVRYNIARGLASALFYLHEEWEQCVLHRDIKPSNVMLDSNFNAKLGDFGLARLMDHEASSKTTNLAGTFGYLSPEAATRGKTSKESDVYSYGIVALEIACGRRVVEQNVNEEQIYLVDWVWELYGKGDILKAADPGLELGAFEEEEMKRLMTVGLWCTHSDYLKRPSMRQTLQVLYFEVPLPNLPSQGTDAPNSVRSLLPENNSQTQPSTSSSSSTFTVGSTHSNNKASSQPLRTF* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3255 697 Pfam Protein kinase domain 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3255 697 ProSiteProfiles Protein kinase domain profile. 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3255 697 Gene3D - 32 279 - -
Ahy13g3255 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 271 IPR013320 -
Ahy13g3255 697 MobiDBLite consensus disorder prediction 648 697 - -
Ahy13g3255 697 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
Ahy13g3255 697 SUPERFAMILY Protein kinase-like (PK-like) 349 654 IPR011009 -
Ahy13g3255 697 SMART serkin_6 366 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3255 697 ProSitePatterns Legume lectins beta-chain signature. 155 161 IPR019825 -
Ahy13g3255 697 Pfam Legume lectin domain 34 270 IPR001220 GO:0030246
Ahy13g3255 697 ProSitePatterns Protein kinases ATP-binding region signature. 372 395 IPR017441 GO:0005524
Ahy13g3255 697 Gene3D Phosphorylase Kinase; domain 1 351 442 - -
Ahy13g3255 697 CDD lectin_legume_LecRK_Arcelin_ConA 35 271 IPR001220 GO:0030246
Ahy13g3255 697 CDD STKc_IRAK 372 636 - -
Ahy13g3255 697 PANTHER LECTIN RECEPTOR KINASE 19 650 - -
Ahy13g3255 697 PANTHER - 19 650 - -
Ahy13g3255 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3255 Ahy-Chr13 129350151 129352780 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3255 13 648 Receptor kinase-like Gene Family AT5G10530 45.031 4.01e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3255 Pkinase 7.30E-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3255 - - adu:107494664 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3255 13 129350151 129352780 Ahy3g2922 3 125560324 125562636 hybridization