Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3254 ATGGCGGTTTCATCCATTTTGTTCCTCTACGTAGTCATCTTCCCTTATTATGCATCATCCTTAACCTTCAACTTTACCAGTTTTGATTCCAACAACAATAACACCCTAAGATATGAAGCATGGGCAGAAGCAGAGGAAGAAACTATCCAGCTGATAGGAAAAGCGCACTTGAATAACAGCATTGGTCGTGCAGTGTACTACAAACCCATGCACCTGTGGGACAAAGCTTCAAGGAACCTCACACACTTCACAACCCATTTCTCATTCATCATTGATTCCCAGAATAGAACTAACTATGCAGATGGACTTGCATTCTTCCTCCGCCCCAACGGTTCCACTGTCCCCAGTGCCACGGCCGGAAGAACTCTGGGCCTCACTGTTGACAACCAAGACACATTCAACATAACTGCAGACCCCTTTGTGGCCGTGGAATTCGATATCTTTAAGAATTATTTCGATCCGCCCAATGAACATGTGGGTATTGATGTTAACTCCTTGAGGTCTGTTGCTAATACCACATGGTTTTCTAAGGCTAACATTAGGGGAGGGAAAGTCAATGAGGCTTGGATCAGTTACAATGCTACTTCCATGAATCTTAGTGTTGTCTTCACTGGTTTCAACTCAGCCACCAACACTACCATGCTGCAGAATCTGTTTGCTGTGGTTGACTTGAGAGAATATCTTCCTGAATATGTTGCAGTTGGATTCTCAGCTGCCACAGGAACTTCTTTTGCTTTGCACAAAATTCTCTCTTGGGATTTAAACTCAACTTTGGGAGACGACATAGCGAAAGCAGAATCCCCTGTTGCAATGAATCCATCTTCCAGTGCAGCTCCCAATCAGAAGAAAAAGGCCAGCAACACAGGACTAGCAGTGGGATTGGGAATTGGTGGAGTTGTTGTGTTTGTTGGGTTGTGTTTGGTTTTGGTTGGATTGTGGAAAAAGTGGAAGAAAGGAAGTGATGAAGAGGAAGACGATGATCAAGATTTTGAGGAGTATATGGGGGAGGATTTCGGAAGAGAAGCAGGACCCAAAAAGTATTCATTTTCTGAATTAGCGTTTGCAGCTGATAACTTCAAAGATGAGAATAAGCTTGGTCAAGGTGGATTTGGAGGTGTTTATAGAGGGTATCTCAAAGATATCAACTCCTACGTTGCCATCAAGAGGGTTTCAGAACATTCTCATCAAGGAATAAAGGAATTCGCATCGGAAGTAAAGATCATTAGCCGGCTTAGGCACCGAAATCTTGTCCAACTGATTGGTTGGTGTCCGGAAAGCAAGAAGCTCTTGCTTGTATATGAGTACATGCCTAATGGAAGTTTAGATGTTCATCTTTTCAAGAAGCAGAATCTGCTGGGTTGGACAGTTAGATACAACATAGCTCGAGGCTTGGCGGCCGCACTGCTATACTTGCACGAAGAATGGGAACAATGTGTTGTGCATAGGGACATCAAATCAAGCAACATCATGCTGGATTCAGAGTTCAATGCCAAACTTGGGGATTTTGGGCTAGCAAGGCTTGTTGACCATGCAAAAGGCGCGCAAACCACGGCTCTAGCCGGTACTCCGGGCTACATGGCTCCAGAATGCAATACTACATTCAGGGCTACTAAAGAATCAGATGTCTACAGTTTTGGAGTGGTGGCATTGGAGATAGCGTGTGGAAGGAAACCCATCACATATAAGGCTCCGGAAAGTGAAATCAATATTGTAGAATGGGTGTGGGGTCTTTATGGAAGTGGAAGGATTCTTGAAGCAGCAGATGAAAGGCTAGATGGAGATTTTGTAAAGGAACAAATGAAATGCTTGATGGTTGTTGGGCTGTGGTGTGCTCACCCATATCACAACAATAGGCCTTCAATAAGACAAGCCATTCAAGTTCTCAACTTTGAAGCTCCCTTACCCACTCTTCCAGCGAAGTTGCCAGTACCAACCTATCTTGATGGGTGA 1950 0.4421 MAVSSILFLYVVIFPYYASSLTFNFTSFDSNNNNTLRYEAWAEAEEETIQLIGKAHLNNSIGRAVYYKPMHLWDKASRNLTHFTTHFSFIIDSQNRTNYADGLAFFLRPNGSTVPSATAGRTLGLTVDNQDTFNITADPFVAVEFDIFKNYFDPPNEHVGIDVNSLRSVANTTWFSKANIRGGKVNEAWISYNATSMNLSVVFTGFNSATNTTMLQNLFAVVDLREYLPEYVAVGFSAATGTSFALHKILSWDLNSTLGDDIAKAESPVAMNPSSSAAPNQKKKASNTGLAVGLGIGGVVVFVGLCLVLVGLWKKWKKGSDEEEDDDQDFEEYMGEDFGREAGPKKYSFSELAFAADNFKDENKLGQGGFGGVYRGYLKDINSYVAIKRVSEHSHQGIKEFASEVKIISRLRHRNLVQLIGWCPESKKLLLVYEYMPNGSLDVHLFKKQNLLGWTVRYNIARGLAAALLYLHEEWEQCVVHRDIKSSNIMLDSEFNAKLGDFGLARLVDHAKGAQTTALAGTPGYMAPECNTTFRATKESDVYSFGVVALEIACGRKPITYKAPESEINIVEWVWGLYGSGRILEAADERLDGDFVKEQMKCLMVVGLWCAHPYHNNRPSIRQAIQVLNFEAPLPTLPAKLPVPTYLDG* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3254 649 ProSitePatterns Legume lectins alpha-chain signature. 228 237 IPR000985 -
Ahy13g3254 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 259 IPR013320 -
Ahy13g3254 649 Gene3D Phosphorylase Kinase; domain 1 344 435 - -
Ahy13g3254 649 SUPERFAMILY Protein kinase-like (PK-like) 343 637 IPR011009 -
Ahy13g3254 649 PANTHER - 11 649 - -
Ahy13g3254 649 CDD STKc_IRAK 365 629 - -
Ahy13g3254 649 Pfam Legume lectin domain 20 263 IPR001220 GO:0030246
Ahy13g3254 649 Gene3D Transferase(Phosphotransferase) domain 1 436 648 - -
Ahy13g3254 649 PANTHER RECEPTOR LECTIN KINASE 11 649 - -
Ahy13g3254 649 Pfam Protein kinase domain 359 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3254 649 CDD lectin_legume_LecRK_Arcelin_ConA 21 258 IPR001220 GO:0030246
Ahy13g3254 649 ProSiteProfiles Protein kinase domain profile. 359 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3254 649 Gene3D - 18 271 - -
Ahy13g3254 649 SMART serkin_6 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3254 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Ahy13g3254 649 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3254 Ahy-Chr13 129347042 129349567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3254 1 646 Receptor kinase-like Gene Family AT5G10530 46.677 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3254 Pkinase 3.00E-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3254 - - gmx:100782344 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3254 13 129347042 129349567 Ahy3g2923 3 125563602 125565569 hybridization