Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3253 ATGGCCACAACATGTCATCAGTGTTATCACAAAAGTTACTTGCATCTTTCTTTTCACGTAACATTGTTCACACTCGTGATATATTATCATCACCATGCACAAGTAGAGGCAGAACCCTTATCCTTCAACTACCCGGATTTCAGTAACCCGGGATACACCTTGACCCTTTCAGGAGAGGCCTATCAGGACAACGGAGTCCTCCAACTCACCAAGTTCCATACCAAAGATAGTCTCGGCAGAGTCGTCTACAGCAAACTACTACATCTCACAGACTTCACTACCACTTTCTCCTTTTCCACCAACACCCCAAATAGATCCTTTTACGGTGATGGGATCACCTTCTTTCTTGCAAAGCCAGATTTCCCACTTCCTGATCCTAGAGATGGCAGTGGAATTGGCCTCATGAGTCGTGCCCAAGCGGGTAACTCAACCTACATAAACCAACATCCATTTGTGGCCGTGGAATTTGATACCTTTTCCAATGACTGGGATCCTCCGTATGCCCACGTGGGTGTGGATGTTGGTTCTTTGCACAGTATTTGCTCTAGACAATGGTTCCAGGTTTGGGACGAAAGAGGATATGATGTTGTTGTCACTTACAAGTCTAGCACAAACAATTTGAGTGTCACCTTCACCGGGTATAAAGATAACATCACAAAAATTGAACAACACTTGTCTTGCGATGAAGTTAATCTGAGGGAAATCTTAACAACAGAATGGGTTGAATTTGGTTTCACTTCAGCAACAGGATATGCACCAGGGAAGGATTTTTCATACGAGTATCATACCCTTAAATCATGGTCCTTCAACTCTACGGACTTAGAGGCGCAACATCACAAGGGTAGAAGCAAGAAAGGTCTAATTATAGGAGTGACCATTGGCGGTGCATGTATTTTGGGGCTACTAGCTTGTCTTTTCAGTTGGAAACTGATGAGGGGGAATAGCGGCTTGGAGAATGCTGATGAGGTTGCTATGGACAGAGATTTTGAACGACGCACTGGTCCTAGGAGGTTCTCCTATCAAGAACTTTCTAGAGCAACTAGCAACTTTGCAAACGGACATAAAATTGGAGAGGGAGGTTTTGGTGGAGTTTACAGAGGATTCCTAAGAGACTTGAACATCCATGTTGCCATCAAGAAGGTTTCCCAGGGATCTCAACAAGGTGTGAGGGAGTATGCATCTGAAGTCAAGATCATTAGTCAACTGAGGCATAAGAATTTGGTTCAACTCATTGGTTGGTGTCACGAGCAGAATGATCTGCTACTGGTTTATGAGTATGTCGAAAATGGGAGCTTAGATTCTTATCTGTTCAAAGGTAAAGGCCTATTAACATGGGAAGTAAGATATAAGATTGCTAGAGGCTTGGCTTCAGCATTGTTATATTTACATGAAGAGTGGGACCATTGTGTGCTTCATAGGGACATCAAACCCAGCAATGTTATGTTGGATTCTAATTTCAATGCGAAGCTCGGAGATTTCGGGTTAGCAAGACTAATGGAGCACGGGACAAGTTCGAAAACAACGGATTTAGCAGGAACATTGGGATATCTAGCTCCTGAAGCTGCAACTAGAGGGAAGGCTAGTAAAGAATCTGATGTATTCAGTTTTGGAGTAGTTATTTTGGAGATAGCATGCGGAAGAAAAGTGATTGAACAAAATAAAATTGAAAATCAGATATACTTGGTGGATTGGGTTTGGGAACTGTATGGCACAGGTATTGTTCTAGAAGCAGGTGATCCAAGATTGTATGGTGTGTTTGATAAAGAAGAAATGGAGAGGTTAATGATTGTTGGCCTTTGGTGTACTCACTCTAATTACGTTATGAGGCCCAAGATTAGTGAAGCTGCTCGTGTGCTTAACCATGAAGCTGCATTGCCCACTCTGTCATCTCAAGAACATGATGGCTCTACGTTGCTCTCAAGGATTCCTGCTTTTTCTGGGAATAACCAAACACAGCCTTCTACTTCAAGTAGCTCTGTCACTGCTGGATCTTCACAATCGGGCAGTGCAACTTCACAACTCATTTCTCCATCGTCTAAGATATTGCACACACGCTAA 2058 0.43 MATTCHQCYHKSYLHLSFHVTLFTLVIYYHHHAQVEAEPLSFNYPDFSNPGYTLTLSGEAYQDNGVLQLTKFHTKDSLGRVVYSKLLHLTDFTTTFSFSTNTPNRSFYGDGITFFLAKPDFPLPDPRDGSGIGLMSRAQAGNSTYINQHPFVAVEFDTFSNDWDPPYAHVGVDVGSLHSICSRQWFQVWDERGYDVVVTYKSSTNNLSVTFTGYKDNITKIEQHLSCDEVNLREILTTEWVEFGFTSATGYAPGKDFSYEYHTLKSWSFNSTDLEAQHHKGRSKKGLIIGVTIGGACILGLLACLFSWKLMRGNSGLENADEVAMDRDFERRTGPRRFSYQELSRATSNFANGHKIGEGGFGGVYRGFLRDLNIHVAIKKVSQGSQQGVREYASEVKIISQLRHKNLVQLIGWCHEQNDLLLVYEYVENGSLDSYLFKGKGLLTWEVRYKIARGLASALLYLHEEWDHCVLHRDIKPSNVMLDSNFNAKLGDFGLARLMEHGTSSKTTDLAGTLGYLAPEAATRGKASKESDVFSFGVVILEIACGRKVIEQNKIENQIYLVDWVWELYGTGIVLEAGDPRLYGVFDKEEMERLMIVGLWCTHSNYVMRPKISEAARVLNHEAALPTLSSQEHDGSTLLSRIPAFSGNNQTQPSTSSSSVTAGSSQSGSATSQLISPSSKILHTR* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3253 685 Pfam Protein kinase domain 352 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3253 685 SMART serkin_6 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3253 685 Gene3D Phosphorylase Kinase; domain 1 335 426 - -
Ahy13g3253 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Ahy13g3253 685 MobiDBLite consensus disorder prediction 640 685 - -
Ahy13g3253 685 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Ahy13g3253 685 ProSitePatterns Protein kinases ATP-binding region signature. 356 380 IPR017441 GO:0005524
Ahy13g3253 685 SUPERFAMILY Protein kinase-like (PK-like) 333 625 IPR011009 -
Ahy13g3253 685 ProSiteProfiles Protein kinase domain profile. 350 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3253 685 CDD STKc_IRAK 356 620 - -
Ahy13g3253 685 Gene3D Transferase(Phosphotransferase) domain 1 427 637 - -
Ahy13g3253 685 PANTHER - 31 681 - -
Ahy13g3253 685 CDD lectin_legume_LecRK_Arcelin_ConA 40 272 IPR001220 GO:0030246
Ahy13g3253 685 PANTHER LECTIN RECEPTOR KINASE 31 681 - -
Ahy13g3253 685 Gene3D - 38 291 - -
Ahy13g3253 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 273 IPR013320 -
Ahy13g3253 685 Pfam Legume lectin domain 40 280 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3253 Ahy-Chr13 129337659 129340275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3253 20 631 Receptor kinase-like Gene Family AT5G10530 43.444 1.40e-157 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Ahy13g3253 Lectin_legB 5.10E-53 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3253 - - cam:101491058 754.207