Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3250 ATGTTGCGGCTTTCTATTCAACGAGTGAAGAAGTTGAACATTTTGAGGCCTCAGATCTTTGCTTTGGGAAGTTCATATATGTCAACGGTTGCTCAGCCATCTGCCAGTAAGCGCAATCCCCAGAGGGTTCCAAATCTTATTGGAGGCAGTTTTGTTGACTCCAAATCATCATCTTTCATTGATGTCATAAACCCAGCAACCCAAGAAGTTGTTTCAAAACTTCCTTTGACTACAAATGAAGAGTTTAAAGCTGCTGTATCTGCAGCAAAGAAAGCATTTCCATCATGGCGTAACACTCCTATTACAACACGCCAGCGTGTGATGCTGAAACTTCAGGAGCTTATTCGTAGAGATATGGATAAACTTGCACTGAGTGTGACCACTGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTTGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAATATGTTTCAAATGTCGCACATGGAATTGATACTTACAGCATTAGAGAACCACTTGGTGTCTGTGCTGGTATTTGTCCTTTCAACTTCCCTGCAATGATTCCCTTGTGGATGTTCCCAATTGCTGTTACATGTGGTAATACCTATGTTCTAAAGCCATCAGAGAAAGATCCAGGTGCTTCTATAATGCTAGCTGAATTGGCATTGGAGGCTGGTTTGCCGGAAGGTGTCCTAAATATAGTCCATGGAACGCATGATATTGTGAATGCTATTTGTGATGATGATGACATCAAAGCCATATCCTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAATCTAATATGGGGGCCAAGAATCATGCCATTGTCTTGCCAGATGCAAATGTTGATGCTACTTTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGTACAGTTATTTTTGTTGGAGGCTCAAAACCTTGGGAAACTAAACTTGTTGAGCGTGCCAAAGCCCTTAAAGTAAATGCTGGAACTGAGCATGATACTGACCTTGGTCCAGTCATCAGCAAACAGGCAAAGGAGCGGATACACAGATTAGTTCAATCTGGGGTTGACAGTGGTGCCAGACTACTGCTTGATGGAAGAAATATAGTGGTACCTGGATATGAGTCTGGAAATTTTGTTGGCCCAACCCTCCTATCGGATGTTAATGCCAACATGGAGTGCTACCAGGAGGAAATTTTTGGCCCAGTTCTTCTTGCGATGGAGGCTGAGCGCTTGGATGACGCCATAAACATTGTCAACCAAAACAAGTATGGTAATGGTGCTTCAATATTTACTACCTCGGGTGTTGCTGCAAGGAAATTTCAGACTGAGATTGAGGCTGGACAGGTTGGCATCAATGTCCCTATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGGGATCTCAATTTCTATGGCAAGGCAGGAGTTAACTTCTATACACAGATCAAAACAATAACTCAGCAATGGAAGGATTCTGCAGCTGGTGGTGGCAAGGTTAACTTGGCAATGCCTACCTCTCAAAAATCTTGA 1620 0.4309 MLRLSIQRVKKLNILRPQIFALGSSYMSTVAQPSASKRNPQRVPNLIGGSFVDSKSSSFIDVINPATQEVVSKLPLTTNEEFKAAVSAAKKAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALSVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVAHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTYVLKPSEKDPGASIMLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVLPDANVDATLNALVAAGFGAAGQRCMALSTVIFVGGSKPWETKLVERAKALKVNAGTEHDTDLGPVISKQAKERIHRLVQSGVDSGARLLLDGRNIVVPGYESGNFVGPTLLSDVNANMECYQEEIFGPVLLAMEAERLDDAINIVNQNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTITQQWKDSAAGGGKVNLAMPTSQKS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3250 539 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 IPR010061 GO:0004491
Ahy13g3250 539 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Ahy13g3250 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Ahy13g3250 539 SUPERFAMILY ALDH-like 39 520 IPR016161 GO:0016491
Ahy13g3250 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Ahy13g3250 539 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 28 539 - -
Ahy13g3250 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Ahy13g3250 539 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
Ahy13g3250 539 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3250 Ahy-Chr13 129317576 129323260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3250 1 503 Aldehyde Dehydrogenase Gene Family AT2G14170 79.523 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3250 K00140 - gmx:100811544 966.066