Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3194 ATGGATCGGTACAGCAGCATCTCAGGGGATTATTTGTTAGATCCTCATAATGAAGAGCTGATGAAAGCACTTTACCCTTTTCTCCAAAGTGTTTCTTCATCGCCACCAGCTTCCTCTCCTCTTCCAAACCTCTTCTCACCCTCTTCCTCCATAGGCCTCAACAAACTCACCCCAACACAAATCATCCAAATCCAAGCGCAGTTTCAACTTCGCCAACTTCAACAGCAACAACTTATGTCTTCCACATGTGTCCAACACAGCAACCAAAAGCACCTTTCCCCAAAGGGGGTCCCCATGAAGCACGTGGCCACCACCCCAACCAAAGCCACAAAGCTTTACCGCGGTGTTAGGCAAAGACACTGGGGGAAGTGGGTGGCGGAGATCAGACTCCCCAAGAACCGAACCCGCCTCTGGCTGGGAACCTTCGACACCGCAGAGGAAGCAGCTCTGGCATACGATAACGCGGCTTACAAGCTTCGCGGTGAATTCGCACGCCTCAATTTCCCTCACCTTAAGCACCATGGCACCCGCGTCTTCGGTGAGTTTGGTGATTACAAGCCTCTCCCTTCTTCCGTGGATGCTAAGCTCCAAGCCATTTGCGACAAGTTGGCTCTTTCTCAGAAACAGGAGCCATGCCCCTCTCTTATGAAGGTGGAGCAAGATCAAGTGCTTTATCCTGAGCTGGAGGAGTTTAAGGTGGAGTCGGATGAATCATGTGCAGGATCGTCCTCCCCTGAATCGGCTGCGACCACTCTTTTTGATTTCTCGGATTGTTGCAAGTGGGAGGAACCGGTGAGTTTTGGCTTGGAGAAGTTCCCCTCCGTGGAGATTGATTGGGCAGCCATATGA 849 0.5147 MDRYSSISGDYLLDPHNEELMKALYPFLQSVSSSPPASSPLPNLFSPSSSIGLNKLTPTQIIQIQAQFQLRQLQQQQLMSSTCVQHSNQKHLSPKGVPMKHVATTPTKATKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDNAAYKLRGEFARLNFPHLKHHGTRVFGEFGDYKPLPSSVDAKLQAICDKLALSQKQEPCPSLMKVEQDQVLYPELEEFKVESDESCAGSSSPESAATTLFDFSDCCKWEEPVSFGLEKFPSVEIDWAAI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 233 282 - -
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 46 216 - -
Ahy13g3194 282 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 2 41 - -
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 233 282 - -
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 2 41 - -
Ahy13g3194 282 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF060-LIKE 46 216 - -
Ahy13g3194 282 CDD AP2 111 171 IPR001471 GO:0003700|GO:0006355
Ahy13g3194 282 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Ahy13g3194 282 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
Ahy13g3194 282 Pfam AP2 domain 113 162 IPR001471 GO:0003700|GO:0006355
Ahy13g3194 282 Gene3D AP2/ERF domain 112 170 IPR036955 GO:0003700|GO:0006355
Ahy13g3194 282 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Ahy13g3194 282 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3194 Ahy-Chr13 127802697 127804070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3194 14 282 AP2-EREBP Transcription Factor Family AT4G39780 53.261 3.14e-83 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy13g3194 AP2 3.90E-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3194 K09286 - gmx:100818839 287.73