Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3179 ATGGCACACTCACTTTCTTCCGTTGCAACGGGTCCCAAACTGGGGTTTTCTTACACTTGTCCATCTTGTATTTGGAAACCGAAGCCTAACCCCAAGGTTACTTGTTCAGCACATAAGAGTAATCCATTGGCTGGTATAGGAATTGGGATTGTAGCATCTTCGGTGGTGGCCTTAACGCCCTTCAATGCTGACGCCACCAGAATCGAATACTACGCCACCACGGCTGAGCCCTTGTGCGAGTACAACTACGTTAAGTCCGGCCTCGGTTACTGTGACATTCTCGAGGGCTTCGGCGATGAGGCCCCCCTCGGCGAGCTCATCAATGTTCACTATACCGCAAGGTTCGGGGATGAGAGAGTGTTTGATAGCAGCTACAAACGTGGCAGACCTCTCACCATGCGCATTGGTGTTGGCAAGGTGATTAAGGGGCTAGATCAGGGAATTTTAGGTGGGGAAGGAGTGCCTCCAATGAGGATAGGTGGCAAACGCAAACTCAAGATCCCTCCAATGTTAGCTTATGGCCCTGAACCTGCTGGATGCTTCTCAGGTGACTGCAACATACCCGGCAATGCAACTCTTCTATATGACATTAATTTTGTTGGTATTTATTCTGGTAATAGAAAGTGA 627 0.4912 MAHSLSSVATGPKLGFSYTCPSCIWKPKPNPKVTCSAHKSNPLAGIGIGIVASSVVALTPFNADATRIEYYATTAEPLCEYNYVKSGLGYCDILEGFGDEAPLGELINVHYTARFGDERVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRKLKIPPMLAYGPEPAGCFSGDCNIPGNATLLYDINFVGIYSGNRK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3179 208 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 203 IPR001179 GO:0003755
Ahy13g3179 208 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 101 198 IPR001179 GO:0003755
Ahy13g3179 208 SUPERFAMILY FKBP-like 81 202 - -
Ahy13g3179 208 Gene3D - 77 202 IPR046357 GO:0003755
Ahy13g3179 208 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 32 208 IPR044183 GO:0009507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3179 Ahy-Chr13 127386462 127388221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3179 80 200 Calmodulin-binding Proteins AT3G25230 37.398 4.90e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3179 13 127386462 127388221 Ahy13g3179 13 127386462 127388221 ECH
Ahy13g3179 13 127386462 127388221 Ahy3g2851 3 123918934 123920881 hybridization