Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3168 ATGAATTCTCCAACTTCACACTTTGTTCCCCCAAGAAGGATGGGAGTATATGATCCAATCCACCAGATTAGTATGTGGGAAGAGAATTTCAGAAGTAATGTTAGTTTAAGTGCATCAACGCTCTTAATTGATGATGCGGAGATTAAGTTTGACAATCAGTCAGAATATGCTTCTCATGGAATACCAGGAACATCTAAACAATATGACCAAGAAGCTAACAGACTTGCTGATAAGATACAGAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGCGCAAAAAGGCCTATGTACAGCAACTAGAATCATGTCGCGTGAAGCTAATGCAGTTAGAGCAAGAGGTTGATCATGCAAAACAACAGGGATTACATATTGGTGGTACTGGATTGGGTTCTAATAGTTTGGGTTTTGCTGCCTCTTTAAATTCAGGAATAGCAAACTTCGAGATGGAGTATGGACGTTGGCTAGAAGAGCGGAATAGACATACCTTGGCACTTAGAAATGCTTTAAGTTCTCATATGGGTGACGTAGAACTCGGAGAACTTGTAGATGGCACAATGAACCACTATTTTAAACTCTTTGGCATGAAATCTGCTGCTGCAAAAGCTGATGCTTTCTACGTTATGTCCGGCATGTGGAAATCATCAGCCGAACGATTTTTCTTCTGGATTGGAGGCTTTCGCCCCTCAGAAATTCTAAAGATTCTGGTACCTAGGATTGAAACCATGACAGAGCAACAAAGGTCAGACATAAGCAACCTTGGAAAATCTTGTCAGCAAGCAGAAGATGCCCTTTCACAAGGCATGGACAAACTTCAACAAATGGTTTCAGAATCTGTAGCAGCAGGACAACTTGAAGAACAAACTAACACTCCAAACATGTCTACTGCAATGGAGAGATTGGCAGCTCTAGTGAGCTTTGTGAACCAAGAAACATTGCTGCAAATGTCTCGAATACTTACAAAACGGCAGGCTGCGAGGTGGCTTCTTGCCTTGGGGGAATATTTTCAACGCCTGCAAGCTTTGAGCTCTTTCTGGGCTAATCGTCCTTCCAAACCTGCTGAGTGCTTAATACCTTAG 1089 0.4252 MNSPTSHFVPPRRMGVYDPIHQISMWEENFRSNVSLSASTLLIDDAEIKFDNQSEYASHGIPGTSKQYDQEANRLADKIQRRLAQNREAARKSRLRKKAYVQQLESCRVKLMQLEQEVDHAKQQGLHIGGTGLGSNSLGFAASLNSGIANFEMEYGRWLEERNRHTLALRNALSSHMGDVELGELVDGTMNHYFKLFGMKSAAAKADAFYVMSGMWKSSAERFFFWIGGFRPSEILKILVPRIETMTEQQRSDISNLGKSCQQAEDALSQGMDKLQQMVSESVAAGQLEEQTNTPNMSTAMERLAALVSFVNQETLLQMSRILTKRQAARWLLALGEYFQRLQALSSFWANRPSKPAECLIP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3168 362 Pfam Seed dormancy control 168 240 IPR025422 GO:0006351|GO:0043565
Ahy13g3168 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
Ahy13g3168 362 Coils Coil 97 124 - -
Ahy13g3168 362 Gene3D - 76 127 - -
Ahy13g3168 362 ProSiteProfiles DOG1 domain profile. 148 352 IPR025422 GO:0006351|GO:0043565
Ahy13g3168 362 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Ahy13g3168 362 Pfam bZIP transcription factor 77 112 IPR004827 GO:0003700|GO:0006355
Ahy13g3168 362 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 357 - -
Ahy13g3168 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3168 Ahy-Chr13 126982016 126986591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3168 1 357 Calmodulin-binding Proteins AT5G65210 60.705 1.81e-161 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy13g3168 DOG1 1.30E-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3168 13 126982016 126986591 Ahy13g3168 13 126982016 126986591 ECH
Ahy13g3168 13 126982016 126986591 Ahy3g2840 3 123676846 123681047 hybridization
Ahy13g3168 13 126982016 126986591 Ahy20g1240 20 23833824 23839096 PCT