Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3152 ATGGCGCCGAAGCAGAGAACAGCGAGGAAGGTGAGCCGGAACCCCGAACTGATTAGGGGAATCGGAAAGTACTCGAGGTCCAAGATGTACCACAAGAGGGGACTCTGGGCCATCAAGGCCAAAAACGGCGGCGTTTTGCCTCGCCACGATCCCAAACCTAAGCCTCAAGCACCTTCTCAGAAGCCTCCCAAATTTTATCCTGCTGATGACGTCAAGAAACCCCTTGTCAACAAGCACAAGCCCAAACCTACCAAGCTCAGGGCTAGCATTACTCCTGGAACAGTGCTGATTCTTCTAGCTGGCAGATTTAAGGGAAAGAGAGTAGTGTTCCTGAAGCAGCTTCCTTCGGGCTTGCTTCTTGTTACTGGCCCTTTCAAAATCAATGGAGTGCCTTTGAGACGTGTGAACCAATCCTACGTCATTGGTACATCAACCAAAGTAGATGTCTCTGGTGTTAATGTGGATAAATTTGATGACAAATATTTTGCAAAGGAAGCTGAGAAGAAGAAGAAAAAGGAAGAGGGAGAGTTCTTTGAATCAGAGAAAGAGGAGAAGAAAGTGCTGCCCCAGGAGAAGAAAGATGATCAGAAAACGGTGGACTCTGCTTTGTTAAAATCCATTGAAAGCGTTCTAGATTTGAAGGCATATATTGGTGCTAGGTTTTCCCTCAAGCAAGGCATGAAGCCTCATGAGCTAGTTTTTTAA 705 0.4638 MAPKQRTARKVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGVLPRHDPKPKPQAPSQKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSGVNVDKFDDKYFAKEAEKKKKKEEGEFFESEKEEKKVLPQEKKDDQKTVDSALLKSIESVLDLKAYIGARFSLKQGMKPHELVF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3152 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 - -
Ahy13g3152 234 MobiDBLite consensus disorder prediction 41 86 - -
Ahy13g3152 234 MobiDBLite consensus disorder prediction 172 199 - -
Ahy13g3152 234 Gene3D - 88 174 IPR014722 -
Ahy13g3152 234 Pfam Ribosomal protein L6, N-terminal domain 3 62 IPR005568 GO:0003735|GO:0005840|GO:0006412
Ahy13g3152 234 Pfam Ribosomal protein L6e 127 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
Ahy13g3152 234 Coils Coil 163 183 - -
Ahy13g3152 234 SUPERFAMILY Translation proteins SH3-like domain 88 174 IPR008991 -
Ahy13g3152 234 CDD KOW_RPL6 82 234 IPR041997 -
Ahy13g3152 234 PANTHER 60S RIBOSOMAL PROTEIN L6 1 234 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3152 Ahy-Chr13 126594397 126596191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3152 1 234 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.624 6.73e-123 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3152 13 126594397 126596191 Ahy3g2822 3 123378447 123379961 hybridization