Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3130 ATGATGTCAACAACAACAACTTCACAAACTATGGTTAATAACCAAAGCTTATTTGGGGAGCAAGATCATGATAATGAGAATATGGCTACAGAAATGGGATTTCTTCCTCTTCTACCAACAAACATGATCTTCCCTACGTCTCCTTTGGGATGCAATCAACAACAACCCTGCTACTCGTTATTGAAACCCTTCTCTTCGATATTATCTCCAAATTCACTTGCATCTGATCAAGCTGATTCAACATCAAACCTAACCGCTGAAACCCTACTCGCAACTGATGCGCAACAAAAATCAGGATTGGACCTCACCTCTACCACTTTTCTTGGACCTCAGTTCCTATCTTTGAACAGATCCAGTATAAGTAATCCATGGGCAACGGGAGAAGTACCTGATTGCTTCAGCAGTAAAAGAAATGTAGTAGATAATCATCATCATCATGTGGGGGTTCCTACCATTAAGATGAAGAAAATCAAGGGAAGAAGAAAGGTTAGAGAGCCTAGGTTTTGCTTCAAGACTATGAGCGATGTAGATGTCTTGGACGATGGCTACAAATGGAGGAAGTACGGTCAAAAAGTGGTCAAGAACACACAGCATCCCAGAAGCTACTACCGTTGCACACAAGACAATTGTCGCGTAAAGAAACGTGTGGAGCGCTTAGCTGAGGATCCAAGAATGGTGATAACAACATACGAAGGAAGACATGCACACACTCCATCCAATGATCTTGAAGACTCTCAACCTCCCTCTCAACTTACCAACTTCTTCTGGTAG 771 0.4215 MMSTTTTSQTMVNNQSLFGEQDHDNENMATEMGFLPLLPTNMIFPTSPLGCNQQQPCYSLLKPFSSILSPNSLASDQADSTSNLTAETLLATDAQQKSGLDLTSTTFLGPQFLSLNRSSISNPWATGEVPDCFSSKRNVVDNHHHHVGVPTIKMKKIKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHTPSNDLEDSQPPSQLTNFFW* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3130 256 ProSiteProfiles WRKY domain profile. 174 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3130 256 SMART WRKY_cls 179 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3130 256 SUPERFAMILY WRKY DNA-binding domain 171 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g3130 256 Gene3D WRKY domain 166 232 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g3130 256 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 70 245 - -
Ahy13g3130 256 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g3130 256 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 245 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3130 Ahy-Chr13 125903206 125906038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3130 69 256 WRKY Transcription Factor Family AT4G39410 50.420 9.19e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g3130 WRKY 9.00E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3130 - - adu:107480316 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3130 13 125903206 125906038 Ahy13g3130 13 125903206 125906038 ECH
Ahy13g3130 13 125903206 125906038 Ahy3g2807 3 122727092 122729776 hybridization