Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3102 ATGATGATGAAAGAAAGCAATAATAATAAGAAGGCGTACATGGCAGTGATCCTGATACAAGCCATATACGCAGTCATGTTCCTTCTCTCCAAGGCAGCATTCGACCATGGCATCAACACCTTCATCTTCGTCTTTTATAGGCAGGCCCTGGCCACTGTTTTCCTCGCTCCTTTTGCTTTCTTCTTCGAACGCAAAACTGCACCACCTCTCTCATTTCTCACCCTCTGCAACATCTTCTTCCTTTCTCTCTTCGGGATCACGGGGAGCTTGGACGTATATGGTATTGCACTTATATACACTTCACCCACTTTGGCTTCTGCTACCACTAACTGCCTTCCAGCCATTACCTTCTTCTTGGCACTCTTACTCAGGATTGAAATTCTGAAAGTAAAGACAGCGGCGGGTGTGGCTAAAATGGTAGGTGTGGTGGCATGCTTGTGTGGAGCCGCAACACTTGCTTTCTACAAAGGTCCTCATTTTCAGCTTTTAGGGCACCATCAAATACAACCATCTTCTTCTTCTCCTCCTTCTTCTTCTTCTTGGGTAAAGGGTTGCTTCCTCATGCTCCTCTCTAACTTCCTTTTTGGGATTTGGCTTGTGCTACAGGGTTTTGTGGTGAAAGGATACCCTTCAAAGCTGCGTCTTACGACTCTTCAGTGTTTGTGTAGCTCAATTCAGTCTTTCTGCATTGCATATGGCGTAGAGAGAAGCATTGAGCAATGGAAGCTGAGTTGGAATGTCTCACTCATTGCCGTACTATACTGTGGAATAATGGTGACGGGTGTGACGTATTACATACAAACATGGGTGATAGAGAAGAAAGGGCCAGTGTTTCTGGCCATGTCAACGCCACTCGCTTTCATAATCACCGTCGTCTCCTCCGCAATTCTGCTGCACCAGATCGTAACTTTGGGAAGCATTTTAGGTGGGTTACTATTGGTTATAGGATTGTATAGCGTTCTGTGGGGTAAGACAAGAGAGGAAATGCCCAAAGTCACAGACTTGGAGGTTGGATCGGAGCACCACCCCCCACCGCCGCAATAA 1044 0.4636 MMMKESNNNKKAYMAVILIQAIYAVMFLLSKAAFDHGINTFIFVFYRQALATVFLAPFAFFFERKTAPPLSFLTLCNIFFLSLFGITGSLDVYGIALIYTSPTLASATTNCLPAITFFLALLLRIEILKVKTAAGVAKMVGVVACLCGAATLAFYKGPHFQLLGHHQIQPSSSSPPSSSSWVKGCFLMLLSNFLFGIWLVLQGFVVKGYPSKLRLTTLQCLCSSIQSFCIAYGVERSIEQWKLSWNVSLIAVLYCGIMVTGVTYYIQTWVIEKKGPVFLAMSTPLAFIITVVSSAILLHQIVTLGSILGGLLLVIGLYSVLWGKTREEMPKVTDLEVGSEHHPPPPQ* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3102 347 PANTHER WAT1-RELATED PROTEIN 12 329 - -
Ahy13g3102 347 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020|GO:0016021
Ahy13g3102 347 Pfam EamA-like transporter family 11 143 IPR000620 GO:0016020|GO:0016021
Ahy13g3102 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 326 - -
Ahy13g3102 347 PANTHER WAT1-RELATED PROTEIN 12 329 IPR030184 GO:0016021|GO:0022857
Ahy13g3102 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3102 Ahy-Chr13 124897801 124900619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3102 8 255 Nodulin-like Gene Family AT5G64700 60.311 3.81e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3102 - - ccaj:109799350 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3102 13 124897801 124900619 Ahy13g3102 13 124897801 124900619 ECH
Ahy13g3102 13 124897801 124900619 Ahy20g1962 20 110018481 110022752 ECH
Ahy13g3102 13 124897801 124900619 Ahy3g2777 3 121784368 121786800 hybridization
Ahy13g3102 13 124897801 124900619 Ahy20g1963 20 110108884 110113930 PCT
Ahy13g3102 13 124897801 124900619 Ahy10g1530 10 89002363 89015162 PCT
Ahy20g1963 20 110108884 110113930 Ahy13g3102 13 124897801 124900619 PCT
Ahy10g1530 10 89002363 89015162 Ahy13g3102 13 124897801 124900619 PCT