Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3097 ATGGATGTTGATTCGAAACCACTCAATTCACAAGACAATGTTGAAGATTGCTTGATGACTGGTATGGAAGAGAATGTAAACTGCACTTGTGATTGTGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATAATATTATAAACCAGACATTTGAAACATCGGATGCGGCTTATAACTTGTATGTGCGTTATGCAAGGTGTGTTGGGTTCGGAGTTCGTAAGGGTGATACAGCGCGTGGAAAAGATGGAACACAACACAGAAGGCCATTTTTTTGCAACAAGGAAGGAAAGAGAGCTGAGAAATACATCTGTAATTCGAAAAGGAAAAGGGAGCATAAAGCGCTGACTCGTACGGGTTATGAAGCCATGCTTGCGGTGTACTTTGACACCAAAACTTTAGCTTGGAGAGTTAAAAAATTAGTTGAGAAGCACAACCACGATCTTGTCCCCCAATGTTTGGTACACCTAATTCCAAACCACCGCGGGATGACTGAGGCTCAAAAAGCTCAGGTGAACATCATGCACGATAATGGTCCACCAACCTCTAAAATAATGGGACTAATGGTAGGCCAAGTCGGGGGTTATGCTAATGTTGGGTTCACAAAGAAGGATCTGGATAACCACATTGAAAGAACTCATCGTGCAAAGCTCATTGGTGGGGATCCTAATGCAACAATTAGCTATCTACTTGGAAAGCTGATGTTGACCCCATGGCCATGGGTGGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCAGAAGAATAAGTACAGAAGACCATTGGTAATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACGAAAACATATATGTGGTTGTTGCAAAACTTTCTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGACGGTGATGAGGCAATGAAGGCAGTAATTCAAGAAATTTTCCCAAATGCAACTCACCGATTATGTGGTTGGCACATTCAGAAAAATGTAACGGCAAACATAAAAAGCAAAGGTTTTTCCGACGACTTCAGAAGATGTTTAACAACATCAAGGTGTGAAGGGATAAACAACTTCATCAAAAGGTTTATTAGCATTCGCCAAAGTCTTTTAGAGCTGGTCCAGAATCTTGAATATGCTCTTAGGGATTATAGACACAACAAACTAGTTTCTCAATTTAAGACGGTGTACGGCTGTGTTAACAACTCGCTTAGCTGCATTGGAGCTTTGTGTTGCAAATTTTTACACACGGGAGATTGTGACAGAGGGCAACATATATACACCGTACTTTATGAGCGCAACACCGAGAATATGGAGTGTGAATGTAGTAGGTGGAGTAGTGAAGGCATTCCTTGTAGCCACATGTTTTGTGCCATGAAAAGGGTAGGTTTACAGAAGTTTTCAGAAAGTCTTCTTTTGAGAAGATGGTCCAAGGATGCCAAAAAGTATCTAGATGAAAGTTCAGTTGGAAGCACTGTGCAAGATAGAGAAAGAGAATTTTTAATGCGCTATGGCGCATTGTTAGTGGCAGCTACATAG 1581 0.4168 MDVDSKPLNSQDNVEDCLMTGMEENVNCTCDCGGSSSKCVVVTADNIINQTFETSDAAYNLYVRYARCVGFGVRKGDTARGKDGTQHRRPFFCNKEGKRAEKYICNSKRKREHKALTRTGYEAMLAVYFDTKTLAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMTEAQKAQVNIMHDNGPPTSKIMGLMVGQVGGYANVGFTKKDLDNHIERTHRAKLIGGDPNATISYLLGKLMLTPWPWVDYQCFGDVLAFDTTYQKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTKTYMWLLQNFLDVMLNKSPSVVVTDGDEAMKAVIQEIFPNATHRLCGWHIQKNVTANIKSKGFSDDFRRCLTTSRCEGINNFIKRFISIRQSLLELVQNLEYALRDYRHNKLVSQFKTVYGCVNNSLSCIGALCCKFLHTGDCDRGQHIYTVLYERNTENMECECSRWSSEGIPCSHMFCAMKRVGLQKFSESLLLRRWSKDAKKYLDESSVGSTVQDREREFLMRYGALLVAAT* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3097 526 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Ahy13g3097 526 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 377 IPR031052 GO:0006355
Ahy13g3097 526 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 230 IPR031052 GO:0006355
Ahy13g3097 526 ProSiteProfiles Zinc finger SWIM-type profile. 441 477 IPR007527 GO:0008270
Ahy13g3097 526 PANTHER OS02G0262500 PROTEIN 242 377 - -
Ahy13g3097 526 PANTHER OS02G0262500 PROTEIN 46 230 - -
Ahy13g3097 526 Pfam MULE transposase domain 250 344 IPR018289 -
Ahy13g3097 526 SMART 26again6 452 479 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3097 Ahy-Chr13 124857147 124859038 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g3097 MULE 4.10E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3097 - - aip:107633598 1098.57