Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3094 ATGTGTGAGCCATATATTTCATTACCTGCCATGAATGTGATGGCTTGTGAGCAATTTGATTACTCATTCAGCCCTCCCCCCATGAACCAATTACTCCATGAATATATCTTACAAGATGCATTTCCAAGCCAATCAGATGATCACTTATTATCTTCTCCAAACATCATCTATGATGATGTGTTTGATGAAATGCTTGAGCAAGAGGCCCTGAATGGATTCCTCCATCCAGAAAACTCACAGCAGCCAGACTTTGATTTCATTGGCCATAATGTTACAATGGCTATTGAGTCTGAACTGTGCCAAGAAAACATCCCTATAGCCCAAGAAGAGGAGATGCATGTCTCAAATGAAGAAGGAGATGCATATTTGATGGGAATTCAAGCAGAGCTAATGGGAGAAACTAGTTTGGGAGATCTATTGCTATTAGGAGCTGAAGCTGTTGAAGCACAGAACTTTGTTCTTGCTCTGGACATAATAGAGAGAATTAACAATAATGCATCATCATCATCTTTTTTGGAAAATGGTGATTCTTTATTGAACAGGTTGGCTCTATTCTTTGCTCGGGGTCTGTATTATAAGAGTATAAATGCTCCTCAAGTGCAGTCTGATCCTGTTTCAACACACAACAATGCCTTCGGTGTGTTTCAGATACTCCAGGAACTCTCTCCCTATGTAAAATTCGCTCACTTCACTGCTAATCAAGCCATCTTTGAAGCCACAGAAGGTTCTGAGGATGTTCATGTCATTGATTTTGACATCATGGAGGGGATCCAGTGGCCACCATTGATGATGGACCTTGCAATGAGGAAGAACACTTGTCTTAGAGTAACAGCTGTTGTTGCAGATCAGCAGAGTGTAGCATATGTCCAGCAAACAGGAAGAAGGCTAAAAGAGTTTGCAGATTCTATCGATTTTCCTTTCGCTTTCGATCAGATAGTGATGGTTGGGGAGGAAGATCTTCAAAGAGTTGAACTTGGTCATACAGTTATAGTCAACTGTATGATACACCAATGGATGCCGAACAGAAGCTTCCCATTGATCAAAACATTCCTTGATGGTGTAAGCAAGTTATCACCAAGGCTTGTTGTTTTGGTGGAGGAAGAACTTTTCAACTTTGCTAGGCTAAAATCCATGTCGTTTGTGGAGTTCTTCTGTGAGGCTTTGCACCACTACACTGCACTTAGTGATTCACTTGCTAGTAGTTTGTTGGGTAGGCAGAAGATGGAGCTAACCATGATAGAGAAAGAAGTTATGGGGCAAAGGATTTTGGACAGTGTGAAGCAGTTTCCATGTGAGAGAGAAGAAAGAATGGTGTGGGAAGAAGGGTTTTACTCCTTGAAGAGGTTCAAGCGTGTTGCTATGAGTAGCTGTAATGTTTCACAGGCTAAGTTCTTGGTGAGCTTGTTTGGTGGAGGCTATTGGGCAGGACTCTAG 1434 0.417 MCEPYISLPAMNVMACEQFDYSFSPPPMNQLLHEYILQDAFPSQSDDHLLSSPNIIYDDVFDEMLEQEALNGFLHPENSQQPDFDFIGHNVTMAIESELCQENIPIAQEEEMHVSNEEGDAYLMGIQAELMGETSLGDLLLLGAEAVEAQNFVLALDIIERINNNASSSSFLENGDSLLNRLALFFARGLYYKSINAPQVQSDPVSTHNNAFGVFQILQELSPYVKFAHFTANQAIFEATEGSEDVHVIDFDIMEGIQWPPLMMDLAMRKNTCLRVTAVVADQQSVAYVQQTGRRLKEFADSIDFPFAFDQIVMVGEEDLQRVELGHTVIVNCMIHQWMPNRSFPLIKTFLDGVSKLSPRLVVLVEEELFNFARLKSMSFVEFFCEALHHYTALSDSLASSLLGRQKMELTMIEKEVMGQRILDSVKQFPCEREERMVWEEGFYSLKRFKRVAMSSCNVSQAKFLVSLFGGGYWAGL* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3094 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 473 IPR005202 -
Ahy13g3094 477 Pfam GRAS domain family 138 470 IPR005202 -
Ahy13g3094 477 ProSiteProfiles GRAS family profile. 127 477 IPR005202 -
Ahy13g3094 477 PANTHER OS12G0162700 PROTEIN 15 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3094 Ahy-Chr13 124753374 124754807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3094 218 468 GRAS Transcription Factor Family AT1G55580 37.050 2.94e-38 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy13g3094 GRAS 9.30E-67 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3094 - - gmx:100804613 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3094 13 124753374 124754807 Ahy13g3094 13 124753374 124754807 ECH
Ahy13g3094 13 124753374 124754807 Ahy3g2760 3 121387000 121387749 hybridization