Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3092 ATGAGTTTAACGGGTACAGAAAGCTCAGAAGATGGTGCAGGGCATCCGGAACCTCCCGATCCTGATGTTCTTGAAGTTGACCCTACCTGTCGCTATATTAGGTATAAAGAAGTCATCGGCAAAGGAGCTTTCAAAACTGTTTACAAGGCTTTTGACGAAGTCAATGGAATTGAAGTTGCATGGAGCCAGGTTCAAATTGATGATGTGCTACAGTCACCAGGTGACTTAGAGAGGTTGTACTCAGAAGTGCATCTCCTGAGATCACTGGAACACGATAACATAGTAAGATTCTACAATTCATGGATTGATGAGAAGCACAAAACTGTTAACATGATTACCGAGTTGTTTACATCGGGCAGCCTCAAACAGTATCGGAAAAAACACAAGAAGGTTGACATAAAGGCTATTAAGGGATGGGCAAAACAGATATTAACAGGCTTAAGCTACCTCCACAGTCACAACCCACCAATCATACATAGGGACCTGAAGTGTGATAATATATTTATCAATGGTCATCAGGGAGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAGCGAACCAATGCCAAGAGTGTTATTGGAACCCCGGAGTTTATGGCACCAGAGTTGTATGATGAAAATTACAATGAATTAGCGGATATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAATATCCTTATAGTGAATGCAGAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCTGTTGCACTTTCTAAAGTCAAAGATCCAGAGGTAAAATCCTTCATTGAAAAATGTCTTGTCCCAGCATCTGAAAGATTGTCTGCAAGGGAGCTTCTGATGCATTCCATTCTTGACTTGAATGGTTCGACAAGGATTCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAGGCCGATGCTTGATGTCAGAAGGTCCTACTAGTGCACGTCATGGAAATATTTCTATGGATCTTGGTGGCATGAGTGAACTACCTGTGATCACCGTATTTGATAACTCTACAGATGACGCATCATCATCTCATTCTCCATCTGTTGAGATAAGAATGCCAAAGGGAGGTGACATATTCTTTCTCAAAGGCCAGGAAAATGATGACAATTCTGTATCATTAGTTCTCCGGATAGCTGATCAGAGTGGAAGGGCAAGAAATATCCATTTTATATTCTACCTTGACACTGATACTGCTGTCTCCGTTTCAAGTGAAATGGTTGAGCAACTTGAGCTTGCTGAACAGAATGTCCTCTTCATAGCTGAGTTAATAGATTTGTTACTGCTGAAGTTGGTTCCTGACTGGAAACCTTGTGTTTCAATTGACCATTTGGTTTCTCCAAATGGTAAATATCATGTGACCCAACGTAGAGCCTTGGAGTCGGCCAAATACCAAGAAATCCCAAAACTTTCCAGCCAAATTGTGCCTCAAGAGTTAGGTGCCTTAACCTCAGCTGGAAGATCAGCTGCAGAAGAGAACCATGATAATATGGATTTTGATGAGGTTGTATCTCAAGAGAGCATTGGTATGCAAAGAGCAACTAAGACAGATGATTTGTGTTCTGAGGTGTCGTATGCTTCAGCAACATCAGAACTCAACGATAATAAGCTTTCTGTGGCTTCATTTATGTCTTCTGCTGAATCAGGACTAGCAGACTTAAACATAACTATACCGAATGGAGGGAGTCAATCCTCATTTGTAACTGAAATTGGGGGATCTCCTGATTACAGGATCAAGTTTTCAGAATTGGGAAGTGATGATACGACGAGCTTCTCTACTCATCCTTCCTCCCTGCTTGAACGCGAGGATGAATTCAGAACAGAGCTAGAAATGATTGAACAGAAGTATCACGAGGTAATTAGATTTTTCCAGAAGAAGATACCAGGCCATCATGGAGATTAG 1944 0.411 MSLTGTESSEDGAGHPEPPDPDVLEVDPTCRYIRYKEVIGKGAFKTVYKAFDEVNGIEVAWSQVQIDDVLQSPGDLERLYSEVHLLRSLEHDNIVRFYNSWIDEKHKTVNMITELFTSGSLKQYRKKHKKVDIKAIKGWAKQILTGLSYLHSHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLERTNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECRNSAQIYKKVSSGIKPVALSKVKDPEVKSFIEKCLVPASERLSARELLMHSILDLNGSTRIHPFPLPDIVLPKFGAFEGRCLMSEGPTSARHGNISMDLGGMSELPVITVFDNSTDDASSSHSPSVEIRMPKGGDIFFLKGQENDDNSVSLVLRIADQSGRARNIHFIFYLDTDTAVSVSSEMVEQLELAEQNVLFIAELIDLLLLKLVPDWKPCVSIDHLVSPNGKYHVTQRRALESAKYQEIPKLSSQIVPQELGALTSAGRSAAEENHDNMDFDEVVSQESIGMQRATKTDDLCSEVSYASATSELNDNKLSVASFMSSAESGLADLNITIPNGGSQSSFVTEIGGSPDYRIKFSELGSDDTTSFSTHPSSLLEREDEFRTELEMIEQKYHEVIRFFQKKIPGHHGD* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3092 647 Gene3D Transferase(Phosphotransferase) domain 1 116 295 - -
Ahy13g3092 647 CDD STKc_WNK 31 290 - -
Ahy13g3092 647 MobiDBLite consensus disorder prediction 1 25 - -
Ahy13g3092 647 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3092 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 5 640 - -
Ahy13g3092 647 Pfam Protein kinase domain 35 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3092 647 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Ahy13g3092 647 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3092 647 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Ahy13g3092 647 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 640 - -
Ahy13g3092 647 Gene3D - 384 451 - -
Ahy13g3092 647 SUPERFAMILY Protein kinase-like (PK-like) 35 338 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3092 Ahy-Chr13 124747468 124751087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3092 133 461 MAP Kinase Kinase Kinase AT1G49160 68.085 3.07e-165 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Ahy13g3092 Pkinase 6.50E-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3092 K08867 - gmx:121175054 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3092 13 124747468 124751087 Ahy13g3092 13 124747468 124751087 ECH
Ahy13g3092 13 124747468 124751087 Ahy3g2758 3 121381261 121384673 hybridization
Ahy13g3092 13 124747468 124751087 Ahy20g1980 20 111790757 111794150 PCT
Ahy13g3092 13 124747468 124751087 Ahy10g1545 10 89905816 89909224 PCT
Ahy20g1980 20 111790757 111794150 Ahy13g3092 13 124747468 124751087 PCT
Ahy10g1545 10 89905816 89909224 Ahy13g3092 13 124747468 124751087 PCT