Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3060 ATGCCGGCGTGGTGGAGTAGAAAATCCTGCAAGAACAAACAGCAGAATCAGGGTGAGGTTGAAGATGAGGAAGAGACACGTGGCAGGCAGAAATTCAATCTGATAGGATCGCCGATTAGCATTATCAGCAGCAGGAAGAAAGGCAAGGACAAGAACAAGAACAACAAGAGCTTCGATGAGCTTATCGCCTCTCGCAACTCACCGAGGACAAGCAAGGAATTCGCCAGCGTCGACGGTAACGACAATAACAGAGACCGAGACAGAGGGCTTCCGTTGCCTCGCCCTACGGTTTCGGCCAATCACAGCTTCAACAACGATCAGGGCCTCGTCTTCGGATCTACTTCGCTATCTGGTTCCAGCGTCAGCTCCTCAACCTCTAACGATGACCACCCTATATCTCCTCAATTCATTAACAACAGAGGACAAGGTGACATCAAATTCCATGTGAGGCCAAAGAGTCCAGGTGCTGGGTCAAGGGGGCCGACAAGCCCTACATCGCCACTTCATCAGAGGATTTTGAGTCTCGACTCTCCTACAGGCAAGCAAGAGGATGGAAAAAGTGAATGTCACCCGTTGCCTCTTCCCCCCGGCTCTCCTACTAGTCCTTCCACCCTTTCCACCCCACGGGCAAATGGATCCTTAGAAAACAACGCCAGTAATCTGTCGAAGTGGAAGAAAGGAAAGCTTCTAGGAAGGGGAACTTTTGGGCATGTTTATCTTGGATTTAATAGTGAGAGTGGACAAATGTGTGCAATAAAGGAAGTCAGGGTTGTCTCTGATGATCCAACATCAAAAGAGTGCCTCAGACAACTTAATCAGGGTGAAGAAACACTTTCAGTTTATTTGGAATATGTTTCTGGTGGTTCTATCCATAAATTGCTACAGGAATATGGTTCATTTAAGGAGCCTGTCATTCAAAATTATACCAGGCAGATTGTATCTGGGCTTGCTTATTTGCATGCAAGAAATACAGTACACAGAGATATCAAAGGAGCTAACATACTTGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACTAATAAATTCTGCTGCCTCAGTACTTTCATTCAAAGGAAGTCCATACTGGATGGCACCTGAGGTTGTAATGAATACCAATGGCTATGGTCTTCCAGTTGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCGAAGCCTCCATGGAATCAATATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATCCCTGAACATCTTTCAGATGATGCCAAAAGCTTCATTAAGCTATGTTTAAATAGGGACCCGTTAGCACGCCCAACAGCTCAAATGCTACTAGACCATCCCTTCATTCGTGACCAATCAGCAACAAAAGCTGTAAATGTTAGCATAACCAGAGATGCTTTCCCCCGCATGTTAGATGGAAGCCGGACTCCGCCACCTGTTTTGGAGCATCAATCCAATAGAACAAGTATAACGTCACTTGATGGAGATCATGCAACAAAGACAGCTCGAGCAGCTTCTCACGCATTAAGGAGCCCAAGAGACAACGCAAGAACAATCACATCTTTGCCAGTGTCTCCCTCTTCAAGTCCATTGAGACAATATGGGACAGCACAAAAGAGCGGTTTCTTTTCTCCTCCTCATCCAACTTACACAATGATGGGGCAAAATAATTTCAATTTGAGTGACACGTCGCCATATTCTGTAAGATCAAATGCAGCATTCACTCTCGATCCTTGGCATGAAACGTCTCGATACAAAGCCCAAACACCACTTGGTGGATCTCCAAGAATGAGATTCATTTGA 1833 0.4523 MPAWWSRKSCKNKQQNQGEVEDEEETRGRQKFNLIGSPISIISSRKKGKDKNKNNKSFDELIASRNSPRTSKEFASVDGNDNNRDRDRGLPLPRPTVSANHSFNNDQGLVFGSTSLSGSSVSSSTSNDDHPISPQFINNRGQGDIKFHVRPKSPGAGSRGPTSPTSPLHQRILSLDSPTGKQEDGKSECHPLPLPPGSPTSPSTLSTPRANGSLENNASNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVVSDDPTSKECLRQLNQGEETLSVYLEYVSGGSIHKLLQEYGSFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKLINSAASVLSFKGSPYWMAPEVVMNTNGYGLPVDIWSLGCTILEMATSKPPWNQYEGVAAIFKIGNSKDMPEIPEHLSDDAKSFIKLCLNRDPLARPTAQMLLDHPFIRDQSATKAVNVSITRDAFPRMLDGSRTPPPVLEHQSNRTSITSLDGDHATKTARAASHALRSPRDNARTITSLPVSPSSSPLRQYGTAQKSGFFSPPHPTYTMMGQNNFNLSDTSPYSVRSNAAFTLDPWHETSRYKAQTPLGGSPRMRFI* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3060 610 MobiDBLite consensus disorder prediction 479 547 - -
Ahy13g3060 610 MobiDBLite consensus disorder prediction 59 77 - -
Ahy13g3060 610 SMART serkin_6 224 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3060 610 MobiDBLite consensus disorder prediction 14 30 - -
Ahy13g3060 610 MobiDBLite consensus disorder prediction 1 218 - -
Ahy13g3060 610 MobiDBLite consensus disorder prediction 489 506 - -
Ahy13g3060 610 Pfam Protein kinase domain 273 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3060 610 MobiDBLite consensus disorder prediction 523 547 - -
Ahy13g3060 610 PANTHER MAP KINASE KINASE KINASE 1 591 - -
Ahy13g3060 610 Gene3D Transferase(Phosphotransferase) domain 1 221 481 - -
Ahy13g3060 610 MobiDBLite consensus disorder prediction 158 177 - -
Ahy13g3060 610 SUPERFAMILY Protein kinase-like (PK-like) 221 541 IPR011009 -
Ahy13g3060 610 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Ahy13g3060 610 MobiDBLite consensus disorder prediction 203 218 - -
Ahy13g3060 610 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 591 - -
Ahy13g3060 610 MobiDBLite consensus disorder prediction 44 58 - -
Ahy13g3060 610 ProSiteProfiles Protein kinase domain profile. 224 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g3060 610 MobiDBLite consensus disorder prediction 97 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3060 Ahy-Chr13 122876501 122881742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3060 1 523 MAP Kinase Kinase Kinase AT1G53570 54.189 1.27e-174 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy13g3060 Pkinase 2.90E-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3060 K04421 - gmx:100813122 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3060 13 122876501 122881742 Ahy13g3060 13 122876501 122881742 ECH
Ahy13g3060 13 122876501 122881742 Ahy3g2733 3 120357133 120362361 hybridization
Ahy13g3060 13 122876501 122881742 Ahy20g2017 20 114180592 114186355 PCT
Ahy13g3060 13 122876501 122881742 Ahy10g1581 10 91902941 91908117 PCT
Ahy20g2017 20 114180592 114186355 Ahy13g3060 13 122876501 122881742 PCT
Ahy10g1581 10 91902941 91908117 Ahy13g3060 13 122876501 122881742 PCT