Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3052 ATGAGCAAAGAAGAGAAGGAGGGAAGAAGAGAACCAAATGAGTTTGAGAATAATAAGAAAGTAAGAGTAGAAGAAGAAACACAGAGAGTAGGAAAAAAGCCTATTATTCAAATGAAGAAGATACAAGGTTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCCTCAAACATAAAACCGATCACCCTTTTAAAATCTTCAGTAAATCACCACAACAAGAATTGGAAGAAGCTGAAGAAGAAGAAGAAGATGCTGAAGAAGCAGAAGCAGAAAAAGCTTCATCACAAAGGTGTTGCAGTGGAGGAGGAAGGCATGTTCTCAAGAATGTGAGTTTCAAAGCCAAGCCATGGGAAATCCTTGCAATTGTTGGGCCAAGTGGTGCTGGAAAATCATCACTGCTTGAGATTCTTGCAGGAAAAGTTACTCCACAGAGTGGTTCTGTGTTGCTGAATCACAAGCCTGTGGAGAAAGCTCAGTTCAGGAAGCTCTCAGGTTATGTAACACAGAAGGATACTTTGTTTCCATTACTTACAGTTGAAGAAACTATGATGTTCAGTGCAAAGCTAAGGCTAAGGCTCCCTCAGGAGCAGCTCCAATCTAGGGTCAAGTCACTGATCAAGGAGCTCGGACTTGATCATGTTGCCGGGGCGCGAATTGGTGACGAAAGGGTCCGAGGAATATCCGGTGGTGAAAGACGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAGGTGTTGATTTTGGATGAACCAACTTCTGGTCTTGATAGTACTTCAGCATTGCAAATTATTGATATGCTTAAGGTGATGGCTGATACTAGGGGAAGAACCATAATCCTTAGTATCCATCAACCCGGATTCAGAATTGTGAAGTTGCTCAATTCATTGCTTTTGTTGGCAAATGGTTCTGTTTTACACCATGGCACTGCTGATTTGCTTAGTGTGAATATGAGGCTAATGGGTTTAGAGCTTCCCCTTCATGTCAATGTGGTTGAGTTTTCCATTGAGTCCATTGATGCCTTTCAGCAACAACAGATATGCAAGAGATTCCTGGTACAAACGCCAAGGCGATTGCAGGGGACGGCGCTGCCTCAGAAGAAAGGTGATGATGAACAAGGTGAGTGTAGAAGTGGTAGGTTTACTTTACAACAGCTCTTTCAACAATCCAAGGTGATTGATGAAGAAGCTATCAATGCTGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATCCTCACTCATAGGTTCTCCAAGAACATCTTTCGTACAAAAGAGCTTTTTGCATGTAGGACTATTCAGATGCTGATTTCAGGGCTTGTTCTGGGATCCATCTTTTGTAATCTCAAGGATGATCTTGAGGGAGCAGAAGAAAGGGTTGGTCTATTTGCTTTCATTTTAACTTTTTTGCTATCAAGCACCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGACATCTTGTGGAAGCTACAGAGTATCATCCTATGCTATTGCCAATGGCCTAGTTTACCTACCATTTCTTCTAATCCTAGCCATTTTGTTCTCAATTCCATTATACTGGCTTGTTGGTCTCAACAAGAACTTCATGGCATTTCTACACTTCTTGTTGCTGATATGGCTGATTCTATACACTGCAAATTCAGTTGTGGTCTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTCATTGCTGGTGTCATTGGATCATTCTTCTTGTTCTCTGGATACTTCATATCACAGCATGAGATTCCAAAATATTGGATTTTTATGCATTACATATCTCTTTTTAAGTATCCCTTTGAAGGGTTTCTAATAAATGAGTTCTCCAACTCAGGTAAATGCTTGGAGTACATGTTTGGTGGATGTGTGGTGAGTGGTGAAGATGTGCTCAAAGAAGAAGGTTATGGCGGGGAGAGTAATAGATGGAAAAATGTTGGGGTGATGATGGGCTTCATCTTGCTTTACAGGTTCATATCCTATGTGATTCTTAGATACAGATGTTCACAGAGGGGGTTCAGGAGTGTGGTCATCATCTAA 2088 0.4109 MSKEEKEGRREPNEFENNKKVRVEEETQRVGKKPIIQMKKIQGCEVEAIGINYKILKHKTDHPFKIFSKSPQQELEEAEEEEEDAEEAEAEKASSQRCCSGGGRHVLKNVSFKAKPWEILAIVGPSGAGKSSLLEILAGKVTPQSGSVLLNHKPVEKAQFRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLRLPQEQLQSRVKSLIKELGLDHVAGARIGDERVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLLNSLLLLANGSVLHHGTADLLSVNMRLMGLELPLHVNVVEFSIESIDAFQQQQICKRFLVQTPRRLQGTALPQKKGDDEQGECRSGRFTLQQLFQQSKVIDEEAINAGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLEGAEERVGLFAFILTFLLSSTIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSIPLYWLVGLNKNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISQHEIPKYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGGCVVSGEDVLKEEGYGGESNRWKNVGVMMGFILLYRFISYVILRYRCSQRGFRSVVII* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3052 695 SMART AAA_5 116 334 IPR003593 -
Ahy13g3052 695 Coils Coil 68 98 - -
Ahy13g3052 695 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Ahy13g3052 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 683 - -
Ahy13g3052 695 MobiDBLite consensus disorder prediction 69 99 - -
Ahy13g3052 695 MobiDBLite consensus disorder prediction 75 89 - -
Ahy13g3052 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 316 IPR027417 -
Ahy13g3052 695 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 85 328 IPR003439 GO:0005524
Ahy13g3052 695 ProSitePatterns ABC transporters family signature. 227 241 IPR017871 GO:0005524
Ahy13g3052 695 Gene3D - 69 326 IPR027417 -
Ahy13g3052 695 Pfam ABC transporter 107 255 IPR003439 GO:0005524
Ahy13g3052 695 MobiDBLite consensus disorder prediction 1 29 - -
Ahy13g3052 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 39 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3052 Ahy-Chr13 122712191 122714995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3052 105 333 Calmodulin-binding Proteins AT2G36910 25.620 4.16e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3052 K05681 - gmx:102665974 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3052 13 122712191 122714995 Ahy3g2719 3 120004568 120007279 hybridization