Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3023 ATGAAAAGCCTCTTCCTTGTATCGTTCCTTGCACCAAGATATGTTGCTGAAAGTTCCTCGTGTTGGGTTAGCAGTGCCCCAGTTGGAAGCAGACCCTTCTCTCAACATTTAACCACCAAGTGCTTTGGCAAGCAACTTCACTTCCACTCTCGATGTGTTCTTTTCTCTTCATACACATGTTCTGCAACGCTATCTGTTGTGCCGGACCTACAAGAAAAGGAAACATTTGATGGAGAGAAGGCTTCTTTGCTTCTCAAAGATCTCAGAAAGACCTTTAATTCGGGGAAGACAAAGAGCTATGAGTGGCGAATTTCACAGTTGGAAGGCATAGCCAAGATGCTAGAAGAGAAGGAGAAGGAAATTCTTGATGCTCTTAATAAAGACCTTTCTAAACCAGGATTGGAAGGATATATATCTGAGGTTTCCCAGGCAAAATCATCATGTAGTGAAGCACTTCAAGAACTGAAACACTGGATGAAGCCGGAAAAGGTCAAAACTTCATTCACCACATTACCATCATCAGCAGAGATTGTGTCAGAACCATTGGGAGCTGTGTTGGTCATCTCCACATGGAACTTCCCTTTCTTGTTATCAATGGATCCTGTCATTGGAGCCATATCAGCGGGTAACGCAGTGGTCTTGAAACCATCAGAAATTGCTCCGGCAACTTCATCACTACTTGCAAATTTGATTGAAGGTTATCTAGATAACTCTGCAATAAGAGTAGTTGAAGGGGCTATTCCTGAAACAACTGCACTCTTGGAACAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTAGGGTCGGTCGCATTGTCATGGCTGCTGCTGCAAAGCACCTTACACCTGTGATTCTGGAACTCGGCGGAAAGTGTCCAGCTGTTGTTGATTCAGATGTCAATCTACAAGTTACTGCTAGGAGGATAATAGGTGGAAAGTGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGAATTTGCTCCAAAACTGATAAATGCTTTGAAAGAAGAGTTGAAGCAATTCTTTGGCGAAGATCTGATGGAATCAAAAGACATGTCTCGTATTGTGTCCCCGACCCAGTTTTCGCGGCTGGTGAAGCTCTTGGATGAAGATAAAGTATCTGACAAAATTGTTTTTGGAGGTCAGAGGGATGAGATGAAACTAAAGATTGCACCAACTATCATATTGGATGTTCCAGATGATGCAATGGTGATGCAAGAAGAGATATTTGGGCCAATAATGCCAATCATCACTGTAGAAAACATAGAAGATAGCTTTGGCATAATCAAATCTAAGCCAAAACCTCTTGCTGCTTATCTCTTTACAAACAATGAGCAGTTAAAGAAGGCATATGTGGAAAATATATCTTCTGGAGGGATGCTCATCAATGACACTGTCATACATGTTGCGACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAAAGTGGAATGGGATGTTACCACGGGAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGTCTGTCCTCTATAGAAGTTTTGATGCAGATTCATCCTTAAGGTTCCCTCCATATACACCCGAGAAGGAAAAATTGTTGAAGGCCATTTTCAGTGGCAACATTATTCGCATAATTCTTACTTTGCTTGGATGGTCTTAG 1662 0.4182 MKSLFLVSFLAPRYVAESSSCWVSSAPVGSRPFSQHLTTKCFGKQLHFHSRCVLFSSYTCSATLSVVPDLQEKETFDGEKASLLLKDLRKTFNSGKTKSYEWRISQLEGIAKMLEEKEKEILDALNKDLSKPGLEGYISEVSQAKSSCSEALQELKHWMKPEKVKTSFTTLPSSAEIVSEPLGAVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLIEGYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSDVNLQVTARRIIGGKWACNSGQACISVDYIITRKEFAPKLINALKEELKQFFGEDLMESKDMSRIVSPTQFSRLVKLLDEDKVSDKIVFGGQRDEMKLKIAPTIILDVPDDAMVMQEEIFGPIMPIITVENIEDSFGIIKSKPKPLAAYLFTNNEQLKKAYVENISSGGMLINDTVIHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKSVLYRSFDADSSLRFPPYTPEKEKLLKAIFSGNIIRIILTLLGWS* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3023 553 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 52 553 - -
Ahy13g3023 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 89 508 IPR016162 GO:0016491
Ahy13g3023 553 Pfam Aldehyde dehydrogenase family 86 510 IPR015590 GO:0016491
Ahy13g3023 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 290 490 IPR016163 GO:0016620
Ahy13g3023 553 PANTHER ALDEHYDE DEHYDROGENASE 52 553 IPR012394 GO:0006081
Ahy13g3023 553 SUPERFAMILY ALDH-like 85 525 IPR016161 GO:0016491
Ahy13g3023 553 PIRSF ALDH 67 549 IPR012394 GO:0006081
Ahy13g3023 553 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3023 Ahy-Chr13 121830706 121836541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3023 58 553 Aldehyde Dehydrogenase Gene Family AT4G34240 66.935 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3023 K00128 - gmx:100800699 896.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3023 13 121830706 121836541 Ahy13g3023 13 121830706 121836541 ECH
Ahy13g3023 13 121830706 121836541 Ahy3g2686 3 119187882 119191170 hybridization