Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3009 ATGGCCAGTGCAGGTACCCCTTTGCCGGTAGCATACCAAGCATGGACGAGTCCAGCAGTACCGGACTGGCTAAACAAAGGGGACAACGCATGGCAGATGGTGTCAGCCACCCTGGTGGGGATACAGAGCATGCCCGGATTAGTCATCTTGTACGGAAGCATAGTCAAGAAGAAATGGGCCGTCAACTCCGCCTTCATGGCCCTCTACGCATTCGCCGCGGTTGTCATATGCTGGGTCACTTGGGCCTACAAGATGTCCTTTGGGGACAAGCTCCTGCCCTTCTGGGGTAAAGCTGGGCCCGCCTTGGGCCAGAAGTTCCTCATCAAGCAGGCCGCGCTCCCCGCAACGCCTCATTACTACAACACGGGGGCTCTGGAGACGGCGGAGATTGAGCCATATTATCCCATGGCCACCATGGTGTGGTTTCAGTGCGTTTTCGCAGCCATCGCTGTGGTCATACTGGCCGGCTCGGTGCTGGCTAGGATGAACTTCAAGGCGTGGATGATGTTCGTGCCGTTATGGTTGACTTTCTCGTACACCATAGGCGCGTTCAGCTTGTGGGGTGGTGGCTTCTTGTTCCAGTGGGGTGTTATGGACTACTCTGGTGGTTACGTCATCCATCTTTCCTCCGGCGTTGCAGGCTTCACCGCCGCTTATTGGGTTGGGCCAAGGTCGAAGAAGGACAGGGAGAGGTTCCCACCAAACAACGTGCTGCTAACGCTGACAGGGGCGGGGCTGCTGTGGCTGGGGTGGGCAGGGTTCAACGGAGGGGACCCGTACTCGGCCAACATAGACTCATCGATGGCGGTGCTGAACACGAACGTGTGCGCCGCCACCAGCCTCTTAGTGTGGACGTGGCTTGATGTCATATTCTTCAACAAGCCCTCCGTTATTGGAGCCGTTCAGGGCATGATTACTGGCCTCGTTTGCATCACTCCCGCCGCAGGTCTGGTTCAAGGATGGGCAGCCATAGTTATGGGAGTTCTATCAGGAAGTGTGCCATGGTACACCATGATGGTATTGGGCAAGAAGCTCACAATCTTCCAAATAGTCGACGACACTCTCGCCGTCTTCCACACCCACGCCGTCGCCGGACTCCTGGGCGGCATCCTCACGGGGTTTCTCGCGGAGCCACGGCTGAGTTCCCTGTTTCTTGCGGTGACCAACTCTAGAGGAGCGGTGTACGGAGGGTCGGCTGGGGGAGTTCAAATCCTGAAGCAATTGGTTGGAGGATTGTTCGTCATTGGATGGAATTTGGTAGCCACCTCCATAATTTGTGTGGTGGTGAAGTTGGTGGTTCCTTTGAGAATGACGGATGAAGAGTTGCTGATTGGTGATGATGCAGTTCACGGAGAAGAAGCTTATGCCTTATGGGGTGACGGAGAGAAACTTAGCCTCTACAAAGATGACACCACCCAGCATGGAATGGCAATGGCTTCCAGTGGTGCCACTCAAGTTGTCTAG 1464 0.5567 MASAGTPLPVAYQAWTSPAVPDWLNKGDNAWQMVSATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVVICWVTWAYKMSFGDKLLPFWGKAGPALGQKFLIKQAALPATPHYYNTGALETAEIEPYYPMATMVWFQCVFAAIAVVILAGSVLARMNFKAWMMFVPLWLTFSYTIGAFSLWGGGFLFQWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSKKDRERFPPNNVLLTLTGAGLLWLGWAGFNGGDPYSANIDSSMAVLNTNVCAATSLLVWTWLDVIFFNKPSVIGAVQGMITGLVCITPAAGLVQGWAAIVMGVLSGSVPWYTMMVLGKKLTIFQIVDDTLAVFHTHAVAGLLGGILTGFLAEPRLSSLFLAVTNSRGAVYGGSAGGVQILKQLVGGLFVIGWNLVATSIICVVVKLVVPLRMTDEELLIGDDAVHGEEAYALWGDGEKLSLYKDDTTQHGMAMASSGATQVV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3009 487 Gene3D Ammonium transporter AmtB like domains 9 458 IPR029020 -
Ahy13g3009 487 TIGRFAM amt: ammonium transporter 28 455 IPR001905 GO:0008519|GO:0016020|GO:0072488
Ahy13g3009 487 PANTHER AMMONIUM TRANSPORTER MEP2 19 469 IPR001905 GO:0008519|GO:0016020|GO:0072488
Ahy13g3009 487 ProSitePatterns Ammonium transporters signature. 199 224 IPR018047 GO:0008519|GO:0016020|GO:0072488
Ahy13g3009 487 SUPERFAMILY Ammonium transporter 23 437 - -
Ahy13g3009 487 Pfam Ammonium Transporter Family 30 455 IPR024041 GO:0008519|GO:0016020|GO:0072488
Ahy13g3009 487 PRINTS Rhesus blood group protein signature 362 378 IPR002229 GO:0005887
Ahy13g3009 487 PRINTS Rhesus blood group protein signature 269 291 IPR002229 GO:0005887
Ahy13g3009 487 PRINTS Rhesus blood group protein signature 238 256 IPR002229 GO:0005887
Ahy13g3009 487 PRINTS Rhesus blood group protein signature 143 159 IPR002229 GO:0005887
Ahy13g3009 487 PANTHER AMMONIUM TRANSPORTER 19 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3009 Ahy-Chr13 121452218 121454793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g3009 136 474 Inorganic Solute Cotransporters AT2G38290 69.027 8.18e-164 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3009 K03320 - gmx:100785993 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3009 13 121452218 121454793 Ahy13g3009 13 121452218 121454793 ECH
Ahy13g3009 13 121452218 121454793 Ahy3g2672 3 118334842 118337453 hybridization