Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3006 ATGGGGTCTGTTAACGACGGCAGGCGATGGAAACGTGAGCCAAAGGTGGAGACCAGATGCGGCTGTAAGGCAGAGATGCGCGTCCACGTGCACTCCGATAGTGGTAGATGGATAATATCATACTTTCAGGACGTTCACAACCATGAGTTGCTGGACGATAGACTGACTTTCATGCTACCGTGCCATAGGAAAATGGATGCAGCCGCCATGGAACAAATGAATATGATGCTTAGAGTTGGGATTAAAACGCCACATATTTATTCATCTTTTGTGCAGACTGCCGGGGGATTCCAAAACCTTCCGTTTCTAAAGAGGGATATGTATAACCAGATAGGGAAGCAACGGAGGCTCATTGGCGGGGATGCGACGGCTTGCCGGAAGTTCCTGGAATCAATGGCACAGGCTAATCCTGGAATTCAGCTGGATTATAGTTTGTTTGGGGATGTCGTGGTATTTGATGCGACATATCGGAAGAATAAGTATATGTGTCCACTGGTTGTGTTTTCTGGAATGAATCACCATAACCAGACAATTGTGTTTGCCGCTGCGCTAGTTGCAAATGAGAATGAGCAGACTTACACCTGGTTGCTGCAACAGTTCCTAGATGCCATGAAGGGTAAAGCACCTGGGTGTGTGATAATAGATGGGCATGGAGCGATGAAAAAGGCAATCGATGCGGTGTTTCCTGGGGCCTATCACCGTTTGTGTGCGTGGCATCTGCTGAGGAATGCCACTTCTAACCTAAGCAACCCCAGATTTACTTCTGAATTTAAGAAATGCATGCTGTTCGATTATGAGGTGTGGGAGTTTGAAGATCATTAG 822 0.4696 MGSVNDGRRWKREPKVETRCGCKAEMRVHVHSDSGRWIISYFQDVHNHELLDDRLTFMLPCHRKMDAAAMEQMNMMLRVGIKTPHIYSSFVQTAGGFQNLPFLKRDMYNQIGKQRRLIGGDATACRKFLESMAQANPGIQLDYSLFGDVVVFDATYRKNKYMCPLVVFSGMNHHNQTIVFAAALVANENEQTYTWLLQQFLDAMKGKAPGCVIIDGHGAMKKAIDAVFPGAYHRLCAWHLLRNATSNLSNPRFTSEFKKCMLFDYEVWEFEDH* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3006 273 PANTHER OS02G0262500 PROTEIN 132 271 - -
Ahy13g3006 273 Pfam FAR1 DNA-binding domain 10 51 IPR004330 -
Ahy13g3006 273 PANTHER OS02G0262500 PROTEIN 8 125 - -
Ahy13g3006 273 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 125 IPR031052 GO:0006355
Ahy13g3006 273 Pfam MULE transposase domain 149 243 IPR018289 -
Ahy13g3006 273 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 271 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3006 Ahy-Chr13 121289768 121290654 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g3006 MULE 2.80E-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g3006 - - aip:107633555 574.704