Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2995 ATGGGGACTGCCATAATTCGCAGGAGCATCACCCGCTACCTCAACCACCCTTCTCTTCTTTCTGCTTCTTCTTCTTCTTGGTGTTTGAGTCAGCAACAACATGCGCGTGTTTCGAACCCCCTTTCATCATTTCTTCACACCAAAACCAGCGGTGGCGGTGCAGCACTTCCTTCTTACATGCGAGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATTGAAGAGTTCAACATGCCTCGACCCAAGGCCGGGGAGCTTCTCATCAAAACCAAGGCTTGTGGAGTTTGCCACTCTGATTTGCATGTTTTGAAAGGTGAAATCCCTTTCTCAAGTCCATGTGTTGTGGGTCATGAGATCACTGGTGAAGTTGTTGAACATGGACCTCTCTCGGACCCCAAAATTATTGAAAGGCTTCCACTTGGATCTCGAGTTGTTGGGTCCTTCATCATGCCTTGTGGCAACTGCTCCTATTGTTCAAAGGGCCATGATGATCTATGTGAAGATTTCTTTGCTTATAATCGTGCAAAAGGAACACTATATGATGGTGAAACTCGATTATTTCTTAGAGGCAGTGGAAAACCAGTATTTATGTATAGTATGGGAGGGCTTGCAGAGTACTGTGTTGTGCCAGCAAATGCTTTGTGTGTATTACCGAAAGCATTGCCATATAGCGAATCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGTGCTATGGCTCATGCGGCTGAGGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCTGTGGATGTTCAGGATGAAAAGCTACAAAAAGCAAAGACATTTGGTGCTACTCACACTATAAATTCCACAAAGGAAGATCCCATCCAAAAGATCATTGAAATTACTGGTGGGAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGAAAACCTCAGACATTTGCCCAGTGCACACAGAGCGTGAAGGACGGAGGAAAAGCCGTGATGATTGGACTGGCACAAGCTGGTTCTGTGGGTGAGATGGATATAAACCGGCTTGTTCGTAGAAAGATACAAATTATAGGGTCGTATGGAGGGAGAGCCAGGCAAGATCTTCCAAAGTTAATGAGATTAGCAGAATCAGGAATATTCAATCTTGAGCATGCTGTTTCTAGAAGATACACCTTTGAGGAGGCAGCCAAAGCATTCCAAGATCTCAACCAAGGAAACATTGTTGGTAGAGCTGTCATAGATATAAACTAG 1296 0.4514 MGTAIIRRSITRYLNHPSLLSASSSSWCLSQQQHARVSNPLSSFLHTKTSGGGAALPSYMRGAVYWEPNKPLTIEEFNMPRPKAGELLIKTKACGVCHSDLHVLKGEIPFSSPCVVGHEITGEVVEHGPLSDPKIIERLPLGSRVVGSFIMPCGNCSYCSKGHDDLCEDFFAYNRAKGTLYDGETRLFLRGSGKPVFMYSMGGLAEYCVVPANALCVLPKALPYSESAILGCAVFTAYGAMAHAAEVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVQDEKLQKAKTFGATHTINSTKEDPIQKIIEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSVGEMDINRLVRRKIQIIGSYGGRARQDLPKLMRLAESGIFNLEHAVSRRYTFEEAAKAFQDLNQGNIVGRAVIDIN* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2995 431 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 222 395 IPR036291 -
Ahy13g2995 431 CDD Zn_ADH10 60 429 - -
Ahy13g2995 431 Pfam Zinc-binding dehydrogenase 260 391 IPR013149 -
Ahy13g2995 431 Pfam Alcohol dehydrogenase GroES-like domain 85 216 IPR013154 -
Ahy13g2995 431 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 60 428 - -
Ahy13g2995 431 Gene3D - 64 420 - -
Ahy13g2995 431 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 117 131 IPR002328 GO:0008270|GO:0016491
Ahy13g2995 431 Gene3D - 237 374 - -
Ahy13g2995 431 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 60 428 - -
Ahy13g2995 431 SUPERFAMILY GroES-like 56 263 IPR011032 -
Ahy13g2995 431 SMART PKS_ER_names_mod 67 428 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2995 Ahy-Chr13 120919631 120923343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2995 77 352 Monolignol Biosynthesis Gene Families AT4G37970 28.470 1.13e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2995 - - aprc:113855348 726.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2995 13 120919631 120923343 Ahy13g2995 13 120919631 120923343 ECH
Ahy13g2995 13 120919631 120923343 Ahy3g2655 3 117986932 117990715 hybridization