Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2985 ATGGAGAGGGCACGATTTGGGCTTATCCTTTGTTTGGTTCTTCTCATTGCTTCTCAGGAGATGGTGGTGCAAAGCGAGGGAAGAAAGTGTGATTCACAGAGCCATCATTTTAAAGGGAAATGCTTTAGCGACACAAACTGCGCATCCGTTTGCCATGGTGAGGGCTTCACAGGTGGCGAATGCCGTGGCTTCCGTCAGCGCTGCTTTTGCACTAGAAATTGTTGA 225 0.4889 MERARFGLILCLVLLIASQEMVVQSEGRKCDSQSHHFKGKCFSDTNCASVCHGEGFTGGECRGFRQRCFCTRNC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2985 74 Gene3D - 28 74 IPR036574 -
Ahy13g2985 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Ahy13g2985 74 PANTHER DEFENSIN 1 74 - -
Ahy13g2985 74 SMART gth_4 29 74 IPR003614 GO:0006952
Ahy13g2985 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Ahy13g2985 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Ahy13g2985 74 Pfam Gamma-thionin family 28 74 - -
Ahy13g2985 74 CDD Knot1 39 71 IPR003614 GO:0006952
Ahy13g2985 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Ahy13g2985 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2985 Ahy-Chr13 120354385 120354900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2985 7 74 Plant Defensins Gene Families AT2G02120 57.353 3.47e-25 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2985 - - pvu:PHAVU_009G158100g 116.701