Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2958 ATGTATGTTGTGTTGGGAGATAGAAAGATGGACCCTGACGCATTCACGTCCACCCTCTTCAAGTGGGATTCGCGCACCATCCTCCCAACTTGTTCTTCCTCACTGATGGAGGGGACCGGGGGGCTGAAGGAGCTGTTCCATGCGTACGGGGTGAGGTACTACACGGCGGCGAAGGTGGCAGAGCTGGGGTTCACGGCGAGGACGCTGGTGGACATGAAAGAGGAGGAGCTGGAGCACATGATGAACAGCCTTTCCCAGATCTTCCGTTGGGATCTGCTGGTTGGCGAGCGCTATGGCATCAAAGCTGCCGTCCGAGCTGAGCGTAGACGCATCCAAGACCATCATCAACTTCGAATTGATTCTCTCCCTCAAGAAGGGGTGCAACAACATAAAGAGGCGGTGGGGAGCACGTGGGACGTCAGGAAGAGGATGAGAAGCAGAAGCAAGACGATGAGTGATGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGAGACAAAGAGAGCACCCGTTCATAGTGACGGAGCCTGGGGAAGTGGCACGTGGCAAGAAGAACGGCCTGGATTACCTATTCCATCTGTATGAGCAATGCCGTGATTTCTTGATCCAAGTACAGAACATTGCCAAGGAAAGCGGTCAAAAATGCCCTACCAAGGTGACAAACGAAGTGTTTAGGTACGCCAAGAAGGCAGGAGCTCATTGCATAAACAAGCCAAAGATGAGACACTACGTTCACTGTTACGCGCTTCACTGCCTTGACAAAGACACTTCCAATCAGCTCAGGAGGCAGTTCAAGGAGACAGGCCAGAACGTTGGGGCATGGAGGCAGGCCTGCTACAACCCTCTAGTTGCCATTGCTGCCCTCCACCACCACGACATTGATGCCATCTTTAACTCTCATCCTCGCCTATCCATCTGGTACGTTCCCACGAAGCTTCGCCAGCTTTGTCACGCCCACAGGAACAATTCAGCTTCCACCTCCACCCATCATCATCTTCTCTTCTAG 1002 0.5319 MYVVLGDRKMDPDAFTSTLFKWDSRTILPTCSSSLMEGTGGLKELFHAYGVRYYTAAKVAELGFTARTLVDMKEEELEHMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIQDHHQLRIDSLPQEGVQQHKEAVGSTWDVRKRMRSRSKTMSDEEEEEEEEEERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCRDFLIQVQNIAKESGQKCPTKVTNEVFRYAKKAGAHCINKPKMRHYVHCYALHCLDKDTSNQLRRQFKETGQNVGAWRQACYNPLVAIAALHHHDIDAIFNSHPRLSIWYVPTKLRQLCHAHRNNSASTSTHHHLLF* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2958 333 PANTHER PROTEIN LEAFY 10 327 IPR002910 GO:0003677|GO:0006355
Ahy13g2958 333 Gene3D Protein LEAFY 153 323 IPR038276 -
Ahy13g2958 333 MobiDBLite consensus disorder prediction 135 152 - -
Ahy13g2958 333 MobiDBLite consensus disorder prediction 125 168 - -
Ahy13g2958 333 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 161 323 IPR035209 GO:0003677
Ahy13g2958 333 Coils Coil 141 161 - -
Ahy13g2958 333 Pfam Floricaula / Leafy protein SAM domain 39 115 IPR035079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2958 Ahy-Chr13 119490560 119492111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2958 10 321 Orphan Transcription Factor Family AT5G61850 55.102 3.06e-134 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Ahy13g2958 C_LFY_FLO 3.30E-99 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2958 - - adu:107480074 635.95