Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2940 ATGGCTGAGCTTACTTCAACTCCATCCAATTCTAAAAACGCCAATTTATCTTGTTTCCAACCAACGGTTTGCTTGTATGAATGGTGGCTGGTTAAAGCTAAACATGGATTCGAAGGAAAGCAGTTAGCCATTGGAGGCATTGCATCAAAAAGGGAAGAAGTAGTGCGTGTCTTCACCAGTGCTCCCATTGCGAAACGGCATGATCTGTTCTCTCTTGAGACCACAGATGGGGTTTATATTATCATAAGGGGTTTCATTGACGAGCAGCGCACCATTGATAATGGTTTCCCTCCTGAGGTTTTCAGTCATTTCTTATTTGGTTTTCCTCAAAACTGGGAAAGCTATGCAGCAGATTTGATTAGGGATGAATCAACTATTGGCACTGATTTGGGTAGTGCTGTTCCTAAAAATGTATCATCAATTGATCCTGAGATCTTCTCTGCTGCTCAAGAAAAATCTATCCTGTCTTCTTCGAAACCTTTAAAGGAAGCATTTGGAGCTCATGGGAAGCCACATGCTGAAGGTGAATGGTATGATTCTAACGCTACATGTGGGGTTAATGCTGCTCAAGGTAGTGGCAGCATTAGACGTGTTACCAGGTATTATAACAGGAAAGTCTGTCAGCAGAAGCAGGCTGCTTCTGGAATTACTCTGAAACATCCCGAGGAACTGAACAGTCCAGTGACACCAGCTCAGTTGCAATCTCTGGAAAAAGTAACTACAGAAAAAGTAAATACACCATCTGAGCATCTCGATGAAAGCTCTACATCTAGAGTTTCTAGAACTTTATTTGAAAATGAAGAAGGCTGTTCTAGGAGAAAGAAAGCTACAAGTGAAAAAGGTCAGATCACGTGTGAAAGAAAAATGGCTAGATCTGCCACTGCAACCAAATATCCACGAAAAAGGGGTTTAAGCCCCTCGATCATTGGTGAGAAAGAGAAGATATCCTCAGTGTCTGCTCTATCAAGTTTCAAAAAGTCCAGATCAGGAAGGTTGCTTCTACCACCATTAGAGTTTTGGCGTAACCAGATACCGATTTACAATGCGGACCATGAGGTTACAGAAATTCAGGGAGGTGCATCTGTGGTTCAATAG 1095 0.4219 MAELTSTPSNSKNANLSCFQPTVCLYEWWLVKAKHGFEGKQLAIGGIASKREEVVRVFTSAPIAKRHDLFSLETTDGVYIIIRGFIDEQRTIDNGFPPEVFSHFLFGFPQNWESYAADLIRDESTIGTDLGSAVPKNVSSIDPEIFSAAQEKSILSSSKPLKEAFGAHGKPHAEGEWYDSNATCGVNAAQGSGSIRRVTRYYNRKVCQQKQAASGITLKHPEELNSPVTPAQLQSLEKVTTEKVNTPSEHLDESSTSRVSRTLFENEEGCSRRKKATSEKGQITCERKMARSATATKYPRKRGLSPSIIGEKEKISSVSALSSFKKSRSGRLLLPPLEFWRNQIPIYNADHEVTEIQGGASVVQ* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2940 364 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Ahy13g2940 364 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 141 - -
Ahy13g2940 364 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 220 359 - -
Ahy13g2940 364 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 220 359 - -
Ahy13g2940 364 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 7 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2940 Ahy-Chr13 118745883 118750155 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy13g2940 SANTA 5.10E-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2940 - - adu:107480063 406.371