Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2933 ATGAACCGATTTCCAACATGGAGAGTAATGGCTGTGTTGTTCCTACAACTCAGTTTTTCCATGGAGATCTTCTGCCTCTCTTCTTCTCATGCAGATAGAATTTCTCATCTTCCTGGACAACCCCATGTAGGCTTTCAACAGTTCTCAGGATATATTACAGTGGATGACAAGAAACACAAGGCTCTGTTTTACTATTTTGTTGAATCAGAAGCTGATCCAGCCTCAAAGCCTCTTGTGCTGTGGCTCAATGGAGGACCTGGTTGTTCTTCCCTTGGAGTAGGTGCATTCTCAGAAAATGGACCTTTCAGGCCAGATGGGGAAGCTCTTGTTCAAAATGAGTATAGTTGGAACAAAGTGGCAAACATGTTGTATTTGGAGACACCAGCTGGAGTGGGGTTCTCTTATGCTAAAGGTAGCTCCTCTTATATCAGAGTGAATGATGAAATAACAGCCAGGGACAATCTTGTATTCTTGCAACGCTGGTTTGACAAATTCCCTCAATTCAAGCACAGAGACTTGTTTGTAACAGGTGAAAGTTATGCAGGCCATTATGTTCCACAACTAGCAAAGCTCATGACTGAGATCAACAAAAAGGAGAAGATATTCAATCTGAAAGGCATAGCTTTGGGTAATCCACTTGTAGAATATGCCACTGACTTCAATTCAAGGGCTGAGTTTTTTTGGTCTCACGGATTAATATCAGATTCAACTTATGAAATGTTCACCACAGATTGTAACTATTCTCGGTATGTCAGTGAATACTATAGAGATTCAGTTTCCCCCATTTGTTCAAAGGTTATGAGCCAAGTAAGCAAAGAAACAAGCAAATTTGTGGACAAATATGATGTCACCCTTGATGTTTGCATCTCCTCAGTCCTTTCACAGTCCAAAGTTATTTGCCCGCAAACCCAAAAAGAAAATGAGAGCATTGATGTGTGCGTAGATGACAAAGTTACAAATTATTTGAACAGAAGAGATGTGCAGCAGGTGCTCCATGCCAAGCTTATTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATCCTTGACTATGATATGCTCAACCTGGAAGTTCCTACACTCCCTGTTGTTGGAGCACTCCTAAAAGCTGGAGTTAGGATCTTAATTTACAGCGGTGATCAAGATTCAGTGATTCCACTGACCGGAAGCCGCACCTTGGTTCAAAAGCTGTCAAAACAATTCGGACTGAATACAACAGTCCCTTACAGAGTATGGTTTGAAGGTCAACAGGTTGGTGGATGGACTCAAGTTTATGGCAACATTCTGTCATTTGCAACCATCAGAGGGGCCTCCCATGAAGCTCCTTTCTCACAGCCTGAAAGATCACTTGTTTTATTTAAGTCATTCTTGGAAGACAAGCCTCTACCTGAAATTTTCTGA 1398 0.4192 MNRFPTWRVMAVLFLQLSFSMEIFCLSSSHADRISHLPGQPHVGFQQFSGYITVDDKKHKALFYYFVESEADPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPDGEALVQNEYSWNKVANMLYLETPAGVGFSYAKGSSSYIRVNDEITARDNLVFLQRWFDKFPQFKHRDLFVTGESYAGHYVPQLAKLMTEINKKEKIFNLKGIALGNPLVEYATDFNSRAEFFWSHGLISDSTYEMFTTDCNYSRYVSEYYRDSVSPICSKVMSQVSKETSKFVDKYDVTLDVCISSVLSQSKVICPQTQKENESIDVCVDDKVTNYLNRRDVQQVLHAKLIGVRKWDVCSNILDYDMLNLEVPTLPVVGALLKAGVRILIYSGDQDSVIPLTGSRTLVQKLSKQFGLNTTVPYRVWFEGQQVGGWTQVYGNILSFATIRGASHEAPFSQPERSLVLFKSFLEDKPLPEIF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2933 465 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Ahy13g2933 465 Gene3D alpha/beta hydrolase 29 290 IPR029058 -
Ahy13g2933 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 463 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 Gene3D - 359 457 - -
Ahy13g2933 465 Gene3D - 313 349 - -
Ahy13g2933 465 PANTHER CARBOXYPEPTIDASE 26 463 - -
Ahy13g2933 465 Pfam Serine carboxypeptidase 39 457 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Ahy13g2933 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Ahy13g2933 465 SUPERFAMILY alpha/beta-Hydrolases 35 462 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2933 Ahy-Chr13 118367813 118371475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2933 321 461 Calmodulin-binding Proteins AT2G22960 26.950 2.71e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2933 K16297 - gmx:100800002 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2933 13 118367813 118371475 Ahy3g2596 3 116163143 116167492 hybridization