Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2930 ATGGCTCCCTCTGACCAACCTCGCTACTCTCTTATCCCTTCTTTCCTTTACTCACCAAAAACATTGCTCAACAATGTGTCCTCACATTCTTCTTCTTCATCATCATCACCACCACCATTCTCAGGCTCAGAGGGTAGGAATAGTAATAATAATTTTATGATCCCTGCACCAAAAGAGAGTATTCCATTGTATTCTCCTGCTTACTACGCCGCATGCAGCTTTGGTGGCGTCTTCAGCTGTGGTCTCACTCACATGACCGTCACTCCTCTCGATCTCGTCAAGTGCAACATGCAGATTGACCCAGTAAAGTACAAGAACATATCATCAGGATTCGGAGTTCTGATGAAGGAGCAAGGAATGAGAGGGTTCTTCAGGGGTTGGGTCCCAACACTGCTTGGGTACAGTGCTCAGGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAGAAATACTACTCAGATCTTGCAGGCCCAGAGAATGCAGCCAAGTACAAAACCTTCATATTTCTAGCAGGATCAGCCTCTGCTGAAGTCATTGCTGATATTGCACTGTGCCCCATGGAGGCTGTCAAAGTTCGTGTGCAAACCCAACCTGGCTTTGCGAGAGGTTTGTCAGATGGATTACCCAAGTTCATTAAGGCTGAGGGTGCTGGAGGGTTGTATAAAGGACTTGTTCCACTCTGGGGCCGCCAGATTCCATACACAATGATGAAATTTGCTTCGTTTGAGACTGTTGTGGAGATGCTGTACAAGAATGTCGTCCCAACACCGAAAGATCAGTGCAGCAAAGGATTGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATTGCTGGCGTGCTCTGTGCTATTGTCTCACACCCTGCAGACAATCTTGTTTCCTTCCTGAACAATGCCAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATAGGGCTAGTTGGTCTTTTCACACGTGGACTTCCTCTTCGTATAGTTATGATTGGAACACTAACAGGAGCTCAGTGGGGACTCTATGATTCCTTCAAAGTATTTGTAGGGCTGCCTACCTCTGGTGGAGGTGCACCTAAAGCTGCCAAGTAG 1080 0.4694 MAPSDQPRYSLIPSFLYSPKTLLNNVSSHSSSSSSSPPPFSGSEGRNSNNNFMIPAPKESIPLYSPAYYAACSFGGVFSCGLTHMTVTPLDLVKCNMQIDPVKYKNISSGFGVLMKEQGMRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAAKYKTFIFLAGSASAEVIADIALCPMEAVKVRVQTQPGFARGLSDGLPKFIKAEGAGGLYKGLVPLWGRQIPYTMMKFASFETVVEMLYKNVVPTPKDQCSKGLQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGGAPKAAK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2930 359 MobiDBLite consensus disorder prediction 25 51 - -
Ahy13g2930 359 Pfam Mitochondrial carrier protein 170 252 IPR018108 -
Ahy13g2930 359 Pfam Mitochondrial carrier protein 69 153 IPR018108 -
Ahy13g2930 359 SUPERFAMILY Mitochondrial carrier 68 339 IPR023395 -
Ahy13g2930 359 Gene3D Mitochondrial carrier domain 69 345 IPR023395 -
Ahy13g2930 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Ahy13g2930 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Ahy13g2930 359 PANTHER PHOSPHATE CARRIER PROTEIN 1 358 - -
Ahy13g2930 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Ahy13g2930 359 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 358 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2930 Ahy-Chr13 118054008 118057071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2930 5 358 Chloroplast and Mitochondria Gene Families AT5G14040 75.683 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2930 K15102 - gmx:100800530 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2930 13 118054008 118057071 Ahy3g2590 3 115897936 115900995 hybridization