Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2927 ATGGAAGCTTTTTCTACTTTTCCTTCTTCTTCTTACCATAATCACTACCCAATTCTTCTTGACTCGTCATCGCTCTTCATCCCCAATAACACTACTACTACCCCTCCTCCAATAAAGCTTTATTCTTCTCTTCATCATGATCATCATATGATCAACACTACTGCTGATACTACTAGTCCCCATTATCCTCTTATTCCACCACCTAATCACCAACTCTTTCAACTTCATAATACTACTACTAATAATAGTAATCAGCAGGAAACATCTTCTTTGGATACTAGCTCTGTTGATCAAAGCTCCAAGGTTGTTGCTGCTACCACCATAAGTTACAACAGTAGTGCTGATCCTTCTCCTCCTTTTCTCTCACATAACCACAGCCCTGAGTCCTCTGTGGTTGAAAACGGTGACCAAGTCACTCAGAACACTCCTCCTCCTATTAACATGGCGGACAACAAGCGGAAAACTACCTCTAACTCCTCTTCCTTCAACAACAATAAGGAGTTGTCAGCAGGGAGAGAAGGGAGAAGTAGCAAGAAACAAAGGAAGAGTAATAATGGTGGGAGTGGGGTGAAGAAGGGAGAGGAGAAGGAAAAAGAAGAGGCTCCAACAGCAACAGCAACAGGGTATATCCACGTTAGAGCAAGAAGGGGCCAAGCAACTGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGGGAGAAGATAAGTGAGAGGATGAAGATGTTGCAACGACTTGTGCCAGGCTGTGATAAGGTAACCGGAAAGGCCCTTGTGTTGGACGAGATCATCAATTATGTTCAGTCCCTACAAAATCAAGTAGAGTTCTTGTCAATGAAGCTTGCTTCAGTCAGCCCCTTCTTCTTTGACTTTGCAATGGACCTAGATAATGATAACAATAATGGTCACTTGGTTAGACCACTGGATCAGAATGTTCAGAATCAGAAGATAAGCAGCATAGCATCAACACCAGCACTGGCATCAGTACCACAATGCAGCACAAACCAGGTTACACCCTTTGCTGATACAACCACCATGACCACTACCACCGGTACCACCACCTTTCCCGGTGCTAATAATAATAACAGTGACTATCTTTTGGATTATTCATCAACATCACCAGTTTTTCTACAAGGACAGAGGTCATCAAATGTCTTCTCTGAGTATACCGGTGGTCAATTCTGGGAAGTAGAAGAAGACCAACGACAAAAGCAGCTTCTTCATCCATATGGACTTGGCAGCAACTTAGGTTCCTTGAATTAA 1257 0.432 MEAFSTFPSSSYHNHYPILLDSSSLFIPNNTTTTPPPIKLYSSLHHDHHMINTTADTTSPHYPLIPPPNHQLFQLHNTTTNNSNQQETSSLDTSSVDQSSKVVAATTISYNSSADPSPPFLSHNHSPESSVVENGDQVTQNTPPPINMADNKRKTTSNSSSFNNNKELSAGREGRSSKKQRKSNNGGSGVKKGEEKEKEEAPTATATGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLASVSPFFFDFAMDLDNDNNNGHLVRPLDQNVQNQKISSIASTPALASVPQCSTNQVTPFADTTTMTTTTGTTTFPGANNNNSDYLLDYSSTSPVFLQGQRSSNVFSEYTGGQFWEVEEDQRQKQLLHPYGLGSNLGSLN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2927 418 MobiDBLite consensus disorder prediction 110 170 - -
Ahy13g2927 418 Gene3D - 215 283 IPR036638 GO:0046983
Ahy13g2927 418 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 66 418 IPR024097 GO:0006355
Ahy13g2927 418 MobiDBLite consensus disorder prediction 188 202 - -
Ahy13g2927 418 SMART finulus 224 274 IPR011598 GO:0046983
Ahy13g2927 418 Pfam Helix-loop-helix DNA-binding domain 222 269 IPR011598 GO:0046983
Ahy13g2927 418 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 66 418 - -
Ahy13g2927 418 CDD bHLH_AtBPE_like 208 293 - -
Ahy13g2927 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 283 IPR036638 GO:0046983
Ahy13g2927 418 MobiDBLite consensus disorder prediction 110 224 - -
Ahy13g2927 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2927 Ahy-Chr13 117852620 117855616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2927 136 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 59.748 1.50e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy13g2927 HLH 1.40E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2927 - - ahf:112732895 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2927 13 117852620 117855616 Ahy3g2588 3 115771471 115774442 hybridization