Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2924 ATGAAAGTAACAGAATCCGAAGCGGAGGCGGAGGGGGTGACCGTAAGGGAGTGCATTGAAGTGATGTCAAGCCTCCTGAGCGAAATCCCATCCATGGAGAGCTTCAAGGGAAAGTGGTCACTCATCGGAGCCACACTGACACACCTCCAAACCCACCTCTCCGACTCCGATTTCCCCGCCTCAAACCCACTATCCCTCGACCTCCTCCGCTCTCTCTCGCAAACGCTCCACCACGCTCTCTCCCTCGCCCAACACTGCCACTCCCCCAACCCCCCTCACGGCAAGCTCAAGACACAGAGCGACCTCCACTCCCTCCTCGACACCCTCAACCGCCACCTCCACGACTCCACCATCCTCTCCCGCACCCATATCGACAACGCCGCCGCCCTCTCCACCAACCCCCGCGACTCTCTCAGATCCCAATCCAGGAACCTCATCACCCGCCTCCAAATCGGCTCACCCGACTCTCGAAACTCCGCCATGGACTCCCTGCTTTCTCTTCTCCATCAGGACGACAAGAACGTCGTCATCGCCGTCGCGCAGGGCGTGGTCCCGGTACTCGTGCGCACACTGGATCACTCCACCTCCTCTGAGTCCAAGGAAAAAGCCGTTGCCGCCATCGCCAGAATCTCAACCGTCGACACCAGCAAGCCCGTCCTCGCTGCCGAGGGCTTGCTTCTCCTCAACCATCTCCTCCGGGTCCTCGATTCCGGAAGCGGGTTCGCGAAGGAGAAAGCCTGCATAGCGCTTCAGGCGCTGAGTTACTCGAAGGAGAACGCCAGGGCCATAGGCTCACGCGGCGGAATCTCGTCGCTCTTGGAGATCTGCCAAGCTGGCACTCCCGGTTCTCAAGCCTCCGCCGCCGGCGTTCTCAGGAATTTATCGCGCTTCGCCGAGATCAAGGAGAATCTCGTAGAAGAAAACGCTGTTTTCGTCCTCTTGGGTCTCGCTTCTTCCGGAACTGCGTTGGCGCAAGAGAATGCCATCGCCTGCCTCTGTGGTTTAGTCTCTGAGGACCAAAGCTTGAAGCTTTCGGTGGTTAGGGAAGGTGCGCTGGAGAGCTTGAAGAATTTCTGGGAGTCGGGTCGGAGCCCCGATGTAGCAATTGAATTTCTGGGTCAGCTGGCTTCGTGTTCGCGCGTGGCGGACGTTGTTGTCTCCGATGGGTTTGTTGTGCCGCGTGTGGTGGCTGCATTGGGGTCCGGAGTTATGGCGGTTAGAGTTGCGGCAGGTAGAGCCGCATATGCTATGTGTTTGGAGAGCGCAAGAGCAAGGAAGGAGTTGGGTGAGTGCGGCGGCGTTAGCCCTCTGATAAAGATGCTGGTGGACGGGAAGAGCACGGAGGAGAAGGAGGCGGGTGCGAAAGCATTGTCGGTGATGCTGATGCATGCAGGGAATCGGAGAGTGTTTCGGAAGGACGAGAGAGGGATAGTGAGTGCGGTTCAGCTGTTGAACCCTTCGGTGGTGGGTTTGGATAAGAGGTACCCGGTGTCGTTGCTGGAGTCGCTGGTTCATTCCAAGAAGTGTAAGAAGCAGATGGTTGCTGCTGGTGCTTGTGTTTACACTCAGAAGCTTGTGGACATGGATGTCCCTGGTTCCAAGAAGCTCTTAGAGAGCCTTGGTCGTGCCAAGATTTGGGGTGTTTTTGCTAGACCCTAA 1659 0.5769 MKVTESEAEAEGVTVRECIEVMSSLLSEIPSMESFKGKWSLIGATLTHLQTHLSDSDFPASNPLSLDLLRSLSQTLHHALSLAQHCHSPNPPHGKLKTQSDLHSLLDTLNRHLHDSTILSRTHIDNAAALSTNPRDSLRSQSRNLITRLQIGSPDSRNSAMDSLLSLLHQDDKNVVIAVAQGVVPVLVRTLDHSTSSESKEKAVAAIARISTVDTSKPVLAAEGLLLLNHLLRVLDSGSGFAKEKACIALQALSYSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSRFAEIKENLVEENAVFVLLGLASSGTALAQENAIACLCGLVSEDQSLKLSVVREGALESLKNFWESGRSPDVAIEFLGQLASCSRVADVVVSDGFVVPRVVAALGSGVMAVRVAAGRAAYAMCLESARARKELGECGGVSPLIKMLVDGKSTEEKEAGAKALSVMLMHAGNRRVFRKDERGIVSAVQLLNPSVVGLDKRYPVSLLESLVHSKKCKKQMVAAGACVYTQKLVDMDVPGSKKLLESLGRAKIWGVFARP* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2924 552 SUPERFAMILY ARM repeat 138 478 IPR016024 -
Ahy13g2924 552 Gene3D - 365 538 IPR011989 -
Ahy13g2924 552 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 1 550 - -
Ahy13g2924 552 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 550 - -
Ahy13g2924 552 Gene3D - 132 364 IPR011989 -
Ahy13g2924 552 SMART arm_5 171 212 IPR000225 GO:0005515
Ahy13g2924 552 SMART arm_5 256 296 IPR000225 GO:0005515
Ahy13g2924 552 SMART arm_5 421 462 IPR000225 GO:0005515
Ahy13g2924 552 SMART arm_5 297 337 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2924 Ahy-Chr13 117712881 117715113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2924 138 410 U-box Gene Family AT2G23140 30.797 1.27e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2924 - - pvu:PHAVU_009G163700g 633.639