Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2923 ATGGATAGCAGCCAACATGAAAATGGTAGGCATAACATGGACTACTACAGAGGAGCACATTCCCTGCATCGAGTAAAGGAGCCAAATGCATTAGTCATGAATAAAAAAATAAGGTCCATTATGGCTGAAAGGCAGGCTGCCATTCTAGTACTTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGTGATTTGGCCCTTCGACAAAGGGATGAAGCACTTGCGCAAAGGGATAATGCCCTAAAGGAACGGGATAATGCCCTTACAGCACTTAAAAGTCAGAACATTTTCAAGTCAGGTGATGGAGTTCAACGTGGATCAAAGCGGATGCGCCAAACTGCATGCAGCCCGAAGGATATATCCAGAAGGGATGTCTCTCCAATGACGGCTAAAGTTTCTGAAGCTGTCAAATCTAATCAAGCTAAAAGAATGCAGGACAAAAATGTAATTAATTCTAAGGTATCAAAACCACATAGCAAGGCAAAGAAAATGGGCGAGGATTTAAATAGGCAGGCAGCTTCTGAAGGGATAAAGTTCAAATCTGAATGGGATATGCAGGATGTTGGCTTGAATTTGGTTGCATTTGATGAAACTATCATGCCGGTCCCAATATGCACCTGCACTGGAGTACCCCGGCAGTGCTACAAATGGGGGAATGGCGGATGGCAGTCTTCTTGTTGTACCACGACATTGTCAGTGTATCCACTGCCACAGCTTCCGAACAAGCGCCACGCCCGCATTGGGGGACGAAAGATGAGCGGGAGTGTCTTTACAAGATTGCTTAGTAGGTTTGCTTTGCAAGGTCATGACTTATCTACACCATTGGATCTTAAGAACTACTGGGCTAGACACGGAACAAATCGGTACATTACTATCAAGTAG 894 0.4474 MDSSQHENGRHNMDYYRGAHSLHRVKEPNALVMNKKIRSIMAERQAAILVLELEAAISEKNEALAARDLALRQRDEALAQRDNALKERDNALTALKSQNIFKSGDGVQRGSKRMRQTACSPKDISRRDVSPMTAKVSEAVKSNQAKRMQDKNVINSKVSKPHSKAKKMGEDLNRQAASEGIKFKSEWDMQDVGLNLVAFDETIMPVPICTCTGVPRQCYKWGNGGWQSSCCTTTLSVYPLPQLPNKRHARIGGRKMSGSVFTRLLSRFALQGHDLSTPLDLKNYWARHGTNRYITIK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2923 297 Coils Coil 67 87 - -
Ahy13g2923 297 MobiDBLite consensus disorder prediction 103 133 - -
Ahy13g2923 297 Pfam GAGA binding protein-like family 25 297 IPR010409 -
Ahy13g2923 297 SMART GAGA_bind_2 1 297 IPR010409 -
Ahy13g2923 297 PANTHER - 2 297 IPR010409 -
Ahy13g2923 297 PANTHER PROTEIN BASIC PENTACYSTEINE4 2 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2923 Ahy-Chr13 117628153 117630801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2923 2 297 BBR or BPC Transcription factor family AT2G21240 54.723 1.23e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Ahy13g2923 GAGA_bind 1.90E-91 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2923 - - gmx:100813103 444.121