Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2869 ATGAATCTATACACTTCATTTCTGTTTCTGGGTTTAATTTCCACGCTGTCTTTTGTAGCTTCTGATGCGGTGGCAAAAAATGAAGTTTCGGCGCTTCAAACCTTCAGAGAAGCTATCTTTGATGATCCACATCTTGTTTTGTCCAATTGGAATACCCTGGTTTCGGATCCTTGTGAGTGGAATGGTGTTTTGTGCAATGGACCTCGAGATCATGTCATCAAGCTAATCTTGCACGGAAACAATCTTATTGGAACAATACCAAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGACTTGGGGTTGAATCAGTTATCAGGACCGATTCCTCGAGAAATTGGAAATTTGACCCAAGCAGTGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCCCCAGAGCTTGGAAATTTGAAATACCTTCAAGAACTTCGGTTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGAAGTTCTGATTCAACTATGCATGAGATGTATGCCTCAAATGTGAATTTAACTGGCTTGTGTCGTACGTCTCAATTAAAAGTTGCAGATTTTTCATATAACTTCTTTGTTGGGAGCTTACCCAAATGTTTGCGTGTCCCAAGATCAAGCTTTCAAGGGAATTGCCTTCAGATTAAAGACATAAAGCAGCGGACTTCTGTACAATGTGCTGGTGCTTCACCTGCCCAGAGCCATCCAGTAATGAACCTAAAGCATCGAGCTGCTGAACATGTGTCGAAGCATCAAAGAGCATCAAAACCTTCCTGGCTTTTGGCTCTAGAGATAGTGACGGGAGTCATGGTTGGTTGTCTCTTTTTGATTGCTATTTTCACGGCGTATCAGAGGTTTAACAGCAAATCATCTATCATCATTCCTTGGAAAAAATCTTCAAGCGAGAAAGAGCATATGACAGTATATATAGAATCTGATGTGTTGAAAGATGTGACGAAGTATAGCAGACAAGATCTTGAAGTGGCCTGCGAAGACTTCAGCAACATAATTGGTTCTTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGACCTGAGATTGCTGTAATTTCCCTCTGCATTAAGGAAGAGCATTGGACGGGTTACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTGAATCATGAGAATACAGGAAAACTGCTAGGTTATTGTAGAGAGAGCAATCCTTTTACCAGGATGCTGGTTTTTGATTATGCTTCAAATGGGACACTCTATGAGCACCTACATTGCTATGAAGAAGGGTGCCAATTGTCATGGACACGGCGTATGAAAGTTATTATAGGCATTGCTCGTGGACTCAAGTATTTGCACACGGAAATTGAACCACCATTCACTATCTCAGAGTTGAATTCCAATGCTGTATATCTTACAGAAGACTTTTCACCAAAGCTGGTCGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAGAAGAATTCTGGTTCTATTGGCAGCCAGGGCTCCATGTGCCTTCTTTCAAATTCCGTGGAGGCACGTCGTCTTGACACCAAAGGAAACATATACGGCTTTGCAGTACTTCTATTGGAAATAATCAGCGGACGACCTCCATATTGCAAGGACAAAGGGTACTTGGTGGACTGGGCTAGGGAATATCTTGAGATACCGGAAATGATGTCAAGTGTGGTGGATCCAGAGTTAAAACATTACAGAGAAGACGACTTGAAAGTAATATGTGAGGTGGTATCGCAATGCATCAATGGCGACCCCAATGGCCGTCCGTCAATGCGGGAATTATGTAGCATTCTGGAGGGCAGAATTGACACTTCAATTAGCGTGGATCTCAAGGGATCATCTTTGGCTTGGGCTGAACTTGCCCTTTCATCTTAG 1905 0.4268 MNLYTSFLFLGLISTLSFVASDAVAKNEVSALQTFREAIFDDPHLVLSNWNTLVSDPCEWNGVLCNGPRDHVIKLILHGNNLIGTIPKELGMLKSLKVLDLGLNQLSGPIPREIGNLTQAVKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGPVPAGGSSDSTMHEMYASNVNLTGLCRTSQLKVADFSYNFFVGSLPKCLRVPRSSFQGNCLQIKDIKQRTSVQCAGASPAQSHPVMNLKHRAAEHVSKHQRASKPSWLLALEIVTGVMVGCLFLIAIFTAYQRFNSKSSIIIPWKKSSSEKEHMTVYIESDVLKDVTKYSRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESNPFTRMLVFDYASNGTLYEHLHCYEEGCQLSWTRRMKVIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSEKNSGSIGSQGSMCLLSNSVEARRLDTKGNIYGFAVLLLEIISGRPPYCKDKGYLVDWAREYLEIPEMMSSVVDPELKHYREDDLKVICEVVSQCINGDPNGRPSMRELCSILEGRIDTSISVDLKGSSLAWAELALSS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2869 634 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Ahy13g2869 634 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 75 634 - -
Ahy13g2869 634 PANTHER PROTEIN MALE DISCOVERER 2 6 75 - -
Ahy13g2869 634 SUPERFAMILY Protein kinase-like (PK-like) 316 609 IPR011009 -
Ahy13g2869 634 Gene3D Transferase(Phosphotransferase) domain 1 417 620 - -
Ahy13g2869 634 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 75 - -
Ahy13g2869 634 Gene3D Phosphorylase Kinase; domain 1 297 416 - -
Ahy13g2869 634 SUPERFAMILY L domain-like 27 206 - -
Ahy13g2869 634 Pfam Protein tyrosine and serine/threonine kinase 339 607 IPR001245 GO:0004672|GO:0006468
Ahy13g2869 634 Gene3D Ribonuclease Inhibitor 25 227 IPR032675 -
Ahy13g2869 634 ProSiteProfiles Protein kinase domain profile. 335 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2869 634 PANTHER PROTEIN MALE DISCOVERER 2 75 634 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2869 Ahy-Chr13 114848650 114853687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2869 7 614 Receptor kinase-like Gene Family AT2G35620 28.868 2.34e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Ahy13g2869 PK_Tyr_Ser-Thr 1.50E-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2869 - - gmx:100779744 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2869 13 114848650 114853687 Ahy13g2869 13 114848650 114853687 ECH
Ahy13g2869 13 114848650 114853687 Ahy3g2533 3 112342949 112347773 hybridization
Ahy5g1597 5 42027794 42032140 Ahy13g2869 13 114848650 114853687 PCT