Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2862 ATGATTTCGTACTATGAACTATCACAGGCAACTAATGGATTTGATGAGAGTAATTTGCTTGGTAGGGGCAGTTTTGGCTCTGTGTTCAAAGGTTTACTTTCAAATGGGATGGTGGTTGCTGTCAAAGTGTTTAACTTGGACTTGGAATTAGGATCAAAGAGCTTCAGTGTAGAATGCGAAGCAATGCGCAATCTGCGCCATCGAAATCTCATGAAGATCATAGGTTGTTGTTCAAGTATAGATTACAAGCTTTTAGTGATGGAGTTCATGCCTAATGGGAGCCTTGAGAGATGGTTGTATTCTCATAACCATTGTTTGGACTTCTTGCAAAGGCTAAATATAATGATAAATGTGGCATCTGCATTAGAGTATCTGCATCATGGATCTTCACCTATAGTGGTTCATTGTGATGTCAAACCTTGTAATGTCTTATTGGATGAAGACATGGTTGGCCATGTCAGTGACTTTGGCATTGCCAAATTGCTTGGCGAGGGACAATCCAAAGAATATACCAAGACCATGGCTACAGTTGGCTACATTGCACCGGGTAAGTTATGCTACACCAGATTATAA 573 0.4031 MISYYELSQATNGFDESNLLGRGSFGSVFKGLLSNGMVVAVKVFNLDLELGSKSFSVECEAMRNLRHRNLMKIIGCCSSIDYKLLVMEFMPNGSLERWLYSHNHCLDFLQRLNIMINVASALEYLHHGSSPIVVHCDVKPCNVLLDEDMVGHVSDFGIAKLLGEGQSKEYTKTMATVGYIAPGKLCYTRL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2862 190 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Ahy13g2862 190 SUPERFAMILY Protein kinase-like (PK-like) 2 184 IPR011009 -
Ahy13g2862 190 ProSitePatterns Protein kinases ATP-binding region signature. 20 42 IPR017441 GO:0005524
Ahy13g2862 190 ProSiteProfiles Protein kinase domain profile. 14 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2862 190 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Ahy13g2862 190 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 2 182 - -
Ahy13g2862 190 Pfam Protein kinase domain 15 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2862 190 PANTHER RECEPTOR-LIKE PROTEIN 55 2 182 - -
Ahy13g2862 190 Gene3D Transferase(Phosphotransferase) domain 1 90 188 - -
Ahy13g2862 190 SMART serkin_6 14 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2862 Ahy-Chr13 114643165 114643981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2862 2 182 Receptor kinase-like Gene Family AT3G47570 48.020 5.07e-53 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy13g2862 Pkinase 2.00E-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2862 - K13420 ahf:112735263 388.652