Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2841 ATGTCTGGATGCAATAAATCTCCAAAAAGTGATCAACATTCGATCAAATATAAGCGGAATCAACATGGGGGAAGTCTTTCCCGTGTGAATCATAAGCCTTCTGTTTCCAATAGTGAGAATAAGCAGTGCTACACGAGTTCTGAGCCAAAGCCGAAGCACCCTCAGATACTGAGCACCGCTCAGCTCATCTCTGCAGTAGGACAGATATGGGATTCTGCAAGTTGCCCATTGTCAGTTTTGCTCCGCAAGGAAAATGTGAATCAAGATGATAAAGGGTTCCCGATAAAGAATATTCCTGATGGCATTCATGTGGAAAGGAATGGAGGGGTATGTAGCTCAACTAACACTAATTACTTTCATGTTAATGTGGGAGCTACAGCATATGGTTCACAGATTTTGCAGGAAAAATTAGATTTCCCTACGGTAACACAAAAGGCATTGGTGCTTCAGTCACGTAATGGACGTCAAGAGCATATTGGTTCTTTGTTCCAGAGATTTATGCAGGCCACTGATAACAGTTTAAACGAATATCGGAAAGAAACAAAACTTGGGACTGAGAAAATCTCATTTCAATCCCGAAATGTTTATTGGTGGATGAGTAGGGATGCACCTAAAGGACTTAAATACCACGTGAAGGCTACAGATCTTGGGAACAAGAAAAATAATTTCCCAGTGGGTGGGGACTGCATTTCAACAGATACAAGCACCTTGGCGGTGGCTAATGAGAGTGATGTTTACAATCCTGATTTAGTTTTAGATGAAGATCTACCATTATCCAGTGGTACAGCTACGGACAGAGAAAATGTTAGCACTCTGTGTTCGGATTATTTTCTTCCAGTTTTGCCTGACACTAATTCTGATGTTGGTGCTTGGCAGATCTCGTCTTCTAATATCTATGCAGATTATCATATTAAATCTTTACATACCCGTGATAGTGCTTCTGTCCAGTGCCAGCATAAGCTTGACAATAATGAAATGCTGGAAATTCAAAGAAGACATTTTGCGGATATAACCGATGATGAAGCTAAGGTTCAGAGCTTTGCAGCAACCCGTCAGAAGCCTTGTTATTCTGTTGCAAAGCAAGAGCATGCTTTTTCTGGGGCATTGGCTGGTGTATGTGTTAGCCTTTGTTTACATCCAGTTGACACGATTAAGACGGTTATTCAGTCATGCCGTGCAGAACAGAGATCCATTGTTAACATTGGTAAATCAGTTGTTTCTGACAGAGGATTGCTCGGACTATATCGTGGAATTACTACAAACATTGCATGTTCTGCTCCAATATCTGCAGTTTATACTTTCACCTATGAATCGATTAAAGCAGCTTTGGTTCCTTATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGTGTGGGGGGTGGTGCTGCAAGTATTGCGACCTCTTTTATTTTCACTCCTAGTGAACGAATTAAGCAGCAGATGCAAGTTGGGTCGCATTATCGCAGCTGTTGGGATGCTTTGGTTGGAATTATCAGAAATGGTGGGTTTACATCCCTTTATGCAGGTTGGGGAGCTGTACTGTGCCGAAATGTTCCACATTCAATTATCAAGTTTTATACATATGAAAGCTTGAAGAAAGTGATGCCATCATTGTCATCTACTATTCAACCTAATGCATTTCAGGCCTTATTATGTGGAGGATTAGCTGGATCTACTGCTGCATTGTTCACAACTCCTTTTGATGTGATCAAGACAAGATTGCAGACACAGCTCCCTGGCTCTATAAATCAATATGATAATGTGTTCCAAGGCCTTTACAAAATTAGCAAGAGTGAAGGTTTGAAGGGCCTGTACAGGGGATTGACTCCAAGGTTGATCATGTACATGTCTCAAGGATCACTGTTCTTTGCCTCTTATGAATTTTTCAAGAAAGTGTTTTCTTTGGAAGCATCCAATCCCACTGGTTCACACGTTCATAAATGTTGA 1947 0.4099 MSGCNKSPKSDQHSIKYKRNQHGGSLSRVNHKPSVSNSENKQCYTSSEPKPKHPQILSTAQLISAVGQIWDSASCPLSVLLRKENVNQDDKGFPIKNIPDGIHVERNGGVCSSTNTNYFHVNVGATAYGSQILQEKLDFPTVTQKALVLQSRNGRQEHIGSLFQRFMQATDNSLNEYRKETKLGTEKISFQSRNVYWWMSRDAPKGLKYHVKATDLGNKKNNFPVGGDCISTDTSTLAVANESDVYNPDLVLDEDLPLSSGTATDRENVSTLCSDYFLPVLPDTNSDVGAWQISSSNIYADYHIKSLHTRDSASVQCQHKLDNNEMLEIQRRHFADITDDEAKVQSFAATRQKPCYSVAKQEHAFSGALAGVCVSLCLHPVDTIKTVIQSCRAEQRSIVNIGKSVVSDRGLLGLYRGITTNIACSAPISAVYTFTYESIKAALVPYLPKEYYSFAHCVGGGAASIATSFIFTPSERIKQQMQVGSHYRSCWDALVGIIRNGGFTSLYAGWGAVLCRNVPHSIIKFYTYESLKKVMPSLSSTIQPNAFQALLCGGLAGSTAALFTTPFDVIKTRLQTQLPGSINQYDNVFQGLYKISKSEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKKVFSLEASNPTGSHVHKC* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2841 648 ProSiteProfiles Solute carrier (Solcar) repeat profile. 544 632 IPR018108 -
Ahy13g2841 648 Pfam Mitochondrial carrier protein 545 634 IPR018108 -
Ahy13g2841 648 Pfam Mitochondrial carrier protein 452 535 IPR018108 -
Ahy13g2841 648 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Ahy13g2841 648 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
Ahy13g2841 648 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 641 - -
Ahy13g2841 648 MobiDBLite consensus disorder prediction 19 54 - -
Ahy13g2841 648 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Ahy13g2841 648 Gene3D Mitochondrial carrier domain 450 646 IPR023395 -
Ahy13g2841 648 Gene3D Mitochondrial carrier domain 328 449 IPR023395 -
Ahy13g2841 648 MobiDBLite consensus disorder prediction 1 54 - -
Ahy13g2841 648 SUPERFAMILY Mitochondrial carrier 362 629 IPR023395 -
Ahy13g2841 648 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2841 Ahy-Chr13 113840165 113844279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2841 366 633 Chloroplast and Mitochondria Gene Families AT2G30160 31.095 1.36e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2841 - - gmx:100812271 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2841 13 113840165 113844279 Ahy13g2841 13 113840165 113844279 ECH
Ahy13g2841 13 113840165 113844279 Ahy3g2512 3 110690936 110695945 hybridization