Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2825 ATGCCGATATGGTGGGTGAAGTCTAAAGAGGTGAAGGAGAGAAAGAAGTCAAAAAGGGAAAGTATTATTGATGCAATACAGCAAAAATTTAAGAATGCTTCTGAAAAGATGCGCAATGACAAATCCAAAGGATCTAGAAGACATGTTATTGGCACCAGGTCAGAGAAGCAATCCCAATCTGTTGTAGCTTCAAGAATATCATCACCCTCCTCCACATATGTGTCCCGCTGTCGAAGTTTTTCAGAATTAGAAAGGCCTCTATTTCAGCAGCTCCCACTGTCAGGGTCGCACCTTCCTGCTGTCAGTGACGCAAATTCTGGAATTTGTTTACCATCAAGAATGGAAAGAGCTAGTGGTTCTAAGCAATCTCTGTATTGTCCCCTACCGGCATCTGGTGTTGTTTCCAACAGGGGATATCCTACTGATGCTGAGGGATATATAGATACCGCATCTGTTTCAAGTGATAGCTCTGGTTATAGTGGTGACTCATCTGATTCACATCTCATTAGTCATCTGGCAACCGACTATGAAATTGGAAACAGGGCCACCATTAACAGGTCTTTCAGGTTGGTGCACAGGAACAGATCACCTGTTACTTTCCAGAATGACTTAGGAGCATCCTCAAGCCCAGCTCCTCAAATGTGCGGCGTTAAGAATCCATCTACTTCACCAAAACGGAGTCGTTTGCATTTGCCCAATCTAAAAATAGGCCGTACCTGTGGTCTATTCAGTGCTCAAGAAAGGTCAACATCAAGTCCTTCTAAAAGTCCAGTGAGAGCACTTGGCCCTGACCAGCTATTTAACTCTGCACTATGGACAGGAAAGCCTTGTCCATATGCAGCATCAGGGAACTACTCTAGTCCTGGTTCAGGCCAAAACTCAGATGTTGGGGATCTGCCAGGACAGGTAATTTTGCCTCTTAACAGGTACAGCCCTGAGTGTTCTCCTATACCTAGTCCGAGAATGACAAGCCATGGTCCCCGTTCCAGAATACAGGGTGGTGCTGTCACACCTCTTCATCCACGAGCTGGCACCTTCCCTTTGGAAATAACTACAAGACATCCTGATGATGTTACTCAAAAAACTCATCCTTTACCGCTTCCTCCAATAACAGTCACCAGTTATTGTCTTTCTCCAAACTATTCTTCATCTACAACTCCATCAGCTCCTCGCAGTCCTGCCAGAGCAGAGATCCAAACAAGCCAAGTTTCACGCTGGAAAAAGGGGAAGTTGCTCGGAAGGGGGACATTTGGACATGTTTATCTTGGTTTTGACAGTGAAAGTGGTGAGATGTGTGCGATGAAGGAGGTAACGCTTTTTGCAGATGATGATAAATCAAGGGAATGCGCACAGCAACTTCAACAAGAAATTATGCTTCTAAGTCAGTTGCAGCATCCAAATATAGTCCGATATTATGGTTCTGAAACGGTAGAGGACAAACTTTACATATACTTGGAGTATGTCTCCGCCGGGTCTATTTACAAACTGCTTCGAGAGTATGGCCAGTTAGGTGAAAATGCCATTCGTAATTATACTCGGCAAATTCTATTAGGACTTGCGTATTTGCATGCTAAGAACACTGTCCACCGGGACATTAAGGGAGCCAATATACTAGTGGACCCTAATGGACAGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAACTGGGGAGTCTTGTCCATTTTCATTCAAAGGAAGTCCTCACTGGATGGCACCTGAGGTTGTACATAATTCAAATGATTGTAATCTTGCTGTTGATATATGGAGTCTTGGCTGCACTGTTCTGGAGATGGCTACGACAAAACCACCTTGGAGCCAGTTTGAGGGGGTGGCTGCTATATTTAAGATTTTACAGATGAAGAAACTGCCTGAAGCACCAGAACATCTATCAGAAGATGGAAAAGACTTTGTGAGGCTTTGTCTGCAAAGAAATCCCCAGGACCGCCCATCGGCTGTGCAACTTCTAGAGCATCCATTTGTCAAAAAGGCTACACTAGAAAGAACCATTCTGACTGTACATCCTTCAGAAGCATCACCAGCTATTGTAGATGAACTGAAATCTCTGGCCATTGGACCTGCAAAACATAATTTGTGCTTAGAGTCAGAAATGGCTGCTGGTACCAGTCGGCCAAGAAGGTTGAGAATCGGCTCTGCATCAAGCGATGTGCATACACCAAGGAACATGTCATGCCCCGTTTCTCCCCTTGGACAGCGAACTTTGCCTTTGGGAACATTTGATGTGGCTGGAAGAGTGTCTACAGTTCCAGTAGTTAGTCCTCGTACCACATCTGGCCTATCCACACCATTCAATGATAGTGGTCGTACAATCTCGTTTCATAGAAACAAGCAGCCGATGTTCTCACATGAAACTGCATGTCTGATGCCAAGGTCTCAAGGTGGGTTTCATTATCAGGATCCTACACATGATGCCCTTCGAGTAACCAGACCTTCTCAGGATGTAATAATTTCATCTGATGATGATGTTCTTGCAACCAATTATAAGAGGGTTGTCCGAAGAGAATTTTATAATGTGCCTCAAACGCCCACGAGGGATTGTGTTAGGATGAGTACTTACTTAGATTGCCGAGCCAGTACTCCCAGGCAAGGCCCGACAACACAAATGGCATGTCACCTGCACGTCAGTGACCTGAGGGGACACCGTGCATGTGAATAA 2679 0.4479 MPIWWVKSKEVKERKKSKRESIIDAIQQKFKNASEKMRNDKSKGSRRHVIGTRSEKQSQSVVASRISSPSSTYVSRCRSFSELERPLFQQLPLSGSHLPAVSDANSGICLPSRMERASGSKQSLYCPLPASGVVSNRGYPTDAEGYIDTASVSSDSSGYSGDSSDSHLISHLATDYEIGNRATINRSFRLVHRNRSPVTFQNDLGASSSPAPQMCGVKNPSTSPKRSRLHLPNLKIGRTCGLFSAQERSTSSPSKSPVRALGPDQLFNSALWTGKPCPYAASGNYSSPGSGQNSDVGDLPGQVILPLNRYSPECSPIPSPRMTSHGPRSRIQGGAVTPLHPRAGTFPLEITTRHPDDVTQKTHPLPLPPITVTSYCLSPNYSSSTTPSAPRSPARAEIQTSQVSRWKKGKLLGRGTFGHVYLGFDSESGEMCAMKEVTLFADDDKSRECAQQLQQEIMLLSQLQHPNIVRYYGSETVEDKLYIYLEYVSAGSIYKLLREYGQLGENAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGQIKLADFGMAKHITGESCPFSFKGSPHWMAPEVVHNSNDCNLAVDIWSLGCTVLEMATTKPPWSQFEGVAAIFKILQMKKLPEAPEHLSEDGKDFVRLCLQRNPQDRPSAVQLLEHPFVKKATLERTILTVHPSEASPAIVDELKSLAIGPAKHNLCLESEMAAGTSRPRRLRIGSASSDVHTPRNMSCPVSPLGQRTLPLGTFDVAGRVSTVPVVSPRTTSGLSTPFNDSGRTISFHRNKQPMFSHETACLMPRSQGGFHYQDPTHDALRVTRPSQDVIISSDDDVLATNYKRVVRREFYNVPQTPTRDCVRMSTYLDCRASTPRQGPTTQMACHLHVSDLRGHRACE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2825 892 MobiDBLite consensus disorder prediction 29 53 - -
Ahy13g2825 892 MobiDBLite consensus disorder prediction 381 400 - -
Ahy13g2825 892 SMART serkin_6 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2825 892 Pfam Protein kinase domain 407 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2825 892 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 809 - -
Ahy13g2825 892 Coils Coil 23 43 - -
Ahy13g2825 892 SUPERFAMILY Protein kinase-like (PK-like) 403 663 IPR011009 -
Ahy13g2825 892 ProSitePatterns Protein kinases ATP-binding region signature. 412 435 IPR017441 GO:0005524
Ahy13g2825 892 MobiDBLite consensus disorder prediction 312 341 - -
Ahy13g2825 892 Gene3D Transferase(Phosphotransferase) domain 1 403 688 - -
Ahy13g2825 892 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 809 - -
Ahy13g2825 892 MobiDBLite consensus disorder prediction 29 65 - -
Ahy13g2825 892 ProSiteProfiles Protein kinase domain profile. 406 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2825 892 CDD STKc_MEKK1_plant 405 662 - -
Ahy13g2825 892 MobiDBLite consensus disorder prediction 203 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2825 Ahy-Chr13 112229064 112236263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2825 1 791 MAP Kinase Kinase Kinase AT1G63700 53.317 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy13g2825 Pkinase 1.40E-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2825 K20717 - gmx:100814422 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2825 13 112229064 112236263 Ahy13g2825 13 112229064 112236263 ECH
Ahy13g2825 13 112229064 112236263 Ahy3g2498 3 109522349 109529515 hybridization
Ahy13g2825 13 112229064 112236263 Ahy20g2017 20 114180592 114186355 PCT
Ahy13g2825 13 112229064 112236263 Ahy10g1581 10 91902941 91908117 PCT