Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2818 ATGGATTCGAGCTTTCAGTTCAGTGGTGGAGAGGATGATTCAGATCGGCTTACTGAAGAAAAGTATTTCGGTATCTCTTCTTCGAGTGGGAATGACGACGACGACTCTTTTGGGGATGACTCCGAGACGGGTGAAATGGGTGATGACGTCCACGAGAATGGCGTTGGCGCAGACCCAGTGACATGTGAGGGTAATGCGCCTGAGTTTAGGTCCGCAGAGGATTTCGTGGACAAGGTGTTTAGTACCGAGCAAAAGGCTTATACAGCATGCAAACAATTTTCCCAGCTAAGGGGGTTCGGTGTAAGGAAGGGTGACGTGGCTCAAATAAATGGTATTTTGGTAAGACGAGACTTTTTTTATCACCGGCAAAGTACAAGGCATGAGAAACACTACGATTATCCAGAAAGAGTACATGATGAGAGGTTCGAGAGTCGCATGGATTGTACCGCAAAGTTGAAAATTTACTATGATTTGCAAGACCAGGTTTGGAAAGTCAAGAGGATAGAGGACAACCATAACCACCCTCTTGCTGCAACTATGTTTAGTCATCTTCTTCCTAGTCATCGAAATCTGAGTGAGAGTGATAAGGCTCAAGTTGATAGTCTCAAAAAGTTCAGGATTGCCACATCGAATATTATGGCTTACATGGTCGGACAGTCAGGGGGATATGGGATACTTTGGTTTACGACAAGGGATCTATATAATTATGTTCACAGCCAAAGAATAGCTCAAATAAACGACGGAGACGCAGCAGCAACGATAAGTTATTTGGAGGGCAAGGTCAACGCTGACATGATGTTAGTCGCCAAATATACCAAAACAGCAGACGATCGACTTGGTAGCCTATTATGGGCTGATGGGCAGATGATGGCTGATTACCAGTTGTTCGGTGACGTGCTTGCATTTGATGCAACATACTGGTCCAACAAGTACAAGAAGCCTTTAATAGTCTTTTCCGAATCAAATCACCACAAGCAGACGACGATATTCGGGTTTGCATTGCTGGAGGACGAGGAGGTCCGTACATATAGGTGGGTTTTGTGTAATATTCTGGATGTCATGGATAATAAGACGCCTTATGTTGTGGTCATTGATGGGGATAAAGCTATGCGAGCAGCAATTGCGGAAGTTTTCAAGAAGGCAGTTTACGCAAACTTTGACATTACAGAGTTTGAGGAGTATTGGAAGACGGCTGTGGAGAGTCTAGGATTAATGAACAATAGTTGGGTGAAAAGAACGTATGAATTAAGACAGAGTTGGGCAACGACATATCTACGGGAAACTTTTTGCGCCGGCTACAGCCTTCTGGAATTGGTTCACAGCTTGGATAGGGTGGTGAAAGATTACCGCAATAATAAGGTGACGGCCCAGTTTTATTTGTCGTATTACACTCCTATGCTGACGACAAGTCTTAATAAGATAGAGCTGTTTGCTTTGAAGATATACACTAGAGCAATCTTTAAGGAGGTTAGGAAACAAATTAAAAAGGTTGGGAGTCTACTGTTTTTGGGAAAAGACAGCATAAGCACAATATCCGTCTACAAGTTCTCAAATATGGGGAACCATCATAGGGTCTGCAAGGTGCTATACGATCCGAATGAGCCAAAGATTGAATGTGATTGTCAGATATGGAACAGTGAAGGTATCCCTTGCTGCCACATAATTTGCATGATGAAGTATGAGAGTTTGGATAAAATCCCACCAGGTTTGATACTGAGGCGGTGGTGTAAGAATGCCAAAGAATGGACAGCAATAGCAACACAAGGGACAGAGGGTCACGGCACTCGATTACTATGGTATGGCGCGTTATGCAATGTAATGAATATTGTTGCGAAGCTTGTTTCTGATGATACAGCTGACTTTGCAATGGCCAGGGATGCAATACCCTCTTTGGCACAGAGGCTTCATGGTCGAAGGGGCAATACGATAGACCGTGAGGCTGGACTGAGGCAACAGAACGTCGTAAAGGACCCGTCAGTAACTAGGACAAAGGGGGCCCCTAAGCACGGTAGGAACCTGGCCTCCTCGACACAGGACGAGCCTGTGGGAAAGAGGCGTTGTTGCACTTCTTGCGGGCTTCCAGGTCACACGAAGAGGATGTGCCGGTCGCAAAGGGAGACGAGCCAAGTCGGCCTCCGAGAAGGGATATCAGCCACGGTCAGGAATTCATCATCGAGAGAGCCTAGTTGGAATCCTGAACTACCTACTAGTTCGGAGATATATTTCATGCTTTCGGAGATTTTTTAG 2247 0.4526 MDSSFQFSGGEDDSDRLTEEKYFGISSSSGNDDDDSFGDDSETGEMGDDVHENGVGADPVTCEGNAPEFRSAEDFVDKVFSTEQKAYTACKQFSQLRGFGVRKGDVAQINGILVRRDFFYHRQSTRHEKHYDYPERVHDERFESRMDCTAKLKIYYDLQDQVWKVKRIEDNHNHPLAATMFSHLLPSHRNLSESDKAQVDSLKKFRIATSNIMAYMVGQSGGYGILWFTTRDLYNYVHSQRIAQINDGDAAATISYLEGKVNADMMLVAKYTKTADDRLGSLLWADGQMMADYQLFGDVLAFDATYWSNKYKKPLIVFSESNHHKQTTIFGFALLEDEEVRTYRWVLCNILDVMDNKTPYVVVIDGDKAMRAAIAEVFKKAVYANFDITEFEEYWKTAVESLGLMNNSWVKRTYELRQSWATTYLRETFCAGYSLLELVHSLDRVVKDYRNNKVTAQFYLSYYTPMLTTSLNKIELFALKIYTRAIFKEVRKQIKKVGSLLFLGKDSISTISVYKFSNMGNHHRVCKVLYDPNEPKIECDCQIWNSEGIPCCHIICMMKYESLDKIPPGLILRRWCKNAKEWTAIATQGTEGHGTRLLWYGALCNVMNIVAKLVSDDTADFAMARDAIPSLAQRLHGRRGNTIDREAGLRQQNVVKDPSVTRTKGAPKHGRNLASSTQDEPVGKRRCCTSCGLPGHTKRMCRSQRETSQVGLREGISATVRNSSSREPSWNPELPTSSEIYFMLSEIF* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2818 748 MobiDBLite consensus disorder prediction 704 734 - -
Ahy13g2818 748 MobiDBLite consensus disorder prediction 1 63 - -
Ahy13g2818 748 Pfam MULE transposase domain 299 380 IPR018289 -
Ahy13g2818 748 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 592 IPR031052 GO:0006355
Ahy13g2818 748 MobiDBLite consensus disorder prediction 657 682 - -
Ahy13g2818 748 SMART 26again6 537 564 IPR006564 GO:0008270
Ahy13g2818 748 MobiDBLite consensus disorder prediction 702 734 - -
Ahy13g2818 748 Pfam FAR1 DNA-binding domain 91 177 IPR004330 -
Ahy13g2818 748 ProSiteProfiles Zinc finger SWIM-type profile. 524 562 IPR007527 GO:0008270
Ahy13g2818 748 PANTHER OS01G0607050 PROTEIN 73 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2818 Ahy-Chr13 111675165 111677498 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2818 FAR1 7.40E-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2818 - - aip:107633461 1520.37