Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2800 ATGGCAACGAAAGAGTCAAGCTCTGCTGGTTCTGGTTCTGGTTCTGGTTCTGGTTCGGCAACAGGGGACGCTAAAATCAAGAGGGTAGTGACCCATGGAGGCAGATATGCACAGTACAATGTGTATGGCAACTTGTTCGAGGTGACTTCCAAATATGTCCCTCCCATTCGCCCCATTGGCAGAGGTGCTTATGGCATCATCTGTGCTGCTGTGAACTCAGAGACGCACGAACAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATTATTGATGCTAGAAGGACACTCAGAGAAATCAAGCTCCTTCGTCACATGGATCATGAAAATATAATTGCGATAAAGGATATAATACGACCACCGAAAAGGGAGACGTTCAACGATGTATACATTGTTTATGAATTGATGGACACTGATCTTCATCACATCATTCATTCTGACCAACCTCTCACTGATGGCCACTGTCAGTACTTCTTGTACCAGCTGTTACGGGGACTGAAATATGTGCATTCAGCGAATGTGTTGCACCGCGATCTGAAGCCGAGTAACCTGCTCATGAATGCCAACTGCGACCTCAAGATTGGCGACTTTGGATTGGCAAGGACTACTTCTGAGCAGGATTTCATGACAGAGTATGTTGTCACCCGATGGTACCGTGCCCCCGAGCTGCTCCTTAACTGTTCTGAGTACACCTCTGCCATTGATGTCTGGTCTGTGGGCTGCATTCTTGGTGAGATTATGACCCGAGAGCCCTTGTTCCCTGGCAAGGACTATGTTCATCAACTTAGGCTCATTACTGAGTTGATAGGTTCACCTGACGATGCCAGCCTTGGGTTTCTCCGAAGTGATAATGCAAGAAGATACATCAAGCAGCTTCCGCAGTACCGCAAGCAAAAATTTGCTGCTAGGTTCCCCAATGTCATGCCTGAGGCACTTGATCTCCTAGAAAAGATGCTCATGTTTGATCCTAACAAGCGCATCACAGTTGATGAGGCACTTTGTCATCCATATCTAGCATCACTTCACAACATCAATGATGAGCCGGTTTGTCCGAGGCCATTCAGTTTTGACTTTGAGCATCCAACATGCACTGAAGAGGATGTCAAGGAGCTCATATGGAGGGAATCTGTCAAGTTCAATCCAGATCCACCTTCTCACTAA 1164 0.4656 MATKESSSAGSGSGSGSGSATGDAKIKRVVTHGGRYAQYNVYGNLFEVTSKYVPPIRPIGRGAYGIICAAVNSETHEQVAIKKIGNAFDNIIDARRTLREIKLLRHMDHENIIAIKDIIRPPKRETFNDVYIVYELMDTDLHHIIHSDQPLTDGHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLMNANCDLKIGDFGLARTTSEQDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCILGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYIKQLPQYRKQKFAARFPNVMPEALDLLEKMLMFDPNKRITVDEALCHPYLASLHNINDEPVCPRPFSFDFEHPTCTEEDVKELIWRESVKFNPDPPSH* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2800 387 ProSiteProfiles Protein kinase domain profile. 53 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2800 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 386 - -
Ahy13g2800 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Ahy13g2800 387 MobiDBLite consensus disorder prediction 1 20 - -
Ahy13g2800 387 SMART serkin_6 53 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2800 387 Gene3D Transferase(Phosphotransferase) domain 1 137 366 - -
Ahy13g2800 387 ProSitePatterns MAP kinase signature. 88 191 IPR003527 GO:0004707|GO:0005524|GO:0006468
Ahy13g2800 387 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 26 386 - -
Ahy13g2800 387 ProSitePatterns Protein kinases ATP-binding region signature. 59 83 IPR017441 GO:0005524
Ahy13g2800 387 SUPERFAMILY Protein kinase-like (PK-like) 56 347 IPR011009 -
Ahy13g2800 387 CDD STKc_TEY_MAPK 46 382 - -
Ahy13g2800 387 MobiDBLite consensus disorder prediction 1 23 - -
Ahy13g2800 387 Gene3D Phosphorylase Kinase; domain 1 36 376 - -
Ahy13g2800 387 Pfam Protein kinase domain 57 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2800 Ahy-Chr13 109996565 109999146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2800 18 382 MAP Kinase Gene Family AT4G01370 82.740 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Ahy13g2800 Pkinase 1.40E-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2800 - - adu:107479878 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2800 13 109996565 109999146 Ahy13g2800 13 109996565 109999146 ECH
Ahy13g2800 13 109996565 109999146 Ahy3g2469 3 107516659 107519514 hybridization
Ahy5g1573 5 41679828 41682197 Ahy13g2800 13 109996565 109999146 PCT