Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2783 ATGGATGAGCTTGCTTGCTTCATGGACTGGGATCTGGAATCCATTGTGAGAGGGTGCCCATCAACTGCCACCACCATCATGGAGCACGATCCAAACCCTAATTTCCTTTTTCATCAACAAGATTATGACCTACTTTTCAGTACTAGTAGTTTTCCTGAATTCTCAGAAACCACAAGGGTCCTTGATGAATTGGACGAGCTTTACAAGCCTTTCTACCCAGTTTTCCACACTCTTTCCCCTCATATTCAAAACAATATTAATGAAGATGATAATAATAATCATCATCCCCTACCGTTACCAATAATCCCCAAAGAACCCGAAGATGCCATCAAACAAAACTTGCAGCAAGTTTCCACAGTTTCTAAACCTAAAAAGAGCAAGAAGAACATGAACAAGAGGGTGGTGAAGGAGGTTACAGCGGCGGATATTGGAGTTTGCGACGCATGGGCGTGGCGAAAATACGGACAGAAACCTATCAAGGGTTCACCATATCCACGGAGCTATTACAGGTGCAGCAGCTCGAAAGGATGCGTGGCGAGGAAACAAGTTGAAAGGAACCATCTGGATCCAACGATTTTCTTGGTTACATACACCGCTGAACACAACCATCCCTACCCTACTCGCCGCAACTCTCTCGCAGGGATTTCACGCAAGAACAACTCCTTAACAACAACTACTACTACTACTACAACTTGTTCTTCTTCTTCGAATTCCTCGTCCATGGAAGAACATAAGGGATTCAAGAAGCAGCATGGACTTCTTTGTGAAGCTGCTGAGTTTGGTGATGTTTGGTTTCCAGACACAACAGACATCGATCATGAATTTATGAGGCTTAATAATAAACAAGAACTTGAATTTCATGCTGATGATTTCATTGCTGGTAATTATTAG 891 0.4287 MDELACFMDWDLESIVRGCPSTATTIMEHDPNPNFLFHQQDYDLLFSTSSFPEFSETTRVLDELDELYKPFYPVFHTLSPHIQNNINEDDNNNHHPLPLPIIPKEPEDAIKQNLQQVSTVSKPKKSKKNMNKRVVKEVTAADIGVCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCVARKQVERNHLDPTIFLVTYTAEHNHPYPTRRNSLAGISRKNNSLTTTTTTTTTCSSSSNSSSMEEHKGFKKQHGLLCEAAEFGDVWFPDTTDIDHEFMRLNNKQELEFHADDFIAGNY* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2783 296 Pfam WRKY DNA -binding domain 147 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2783 296 ProSiteProfiles WRKY domain profile. 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2783 296 MobiDBLite consensus disorder prediction 224 243 - -
Ahy13g2783 296 Gene3D WRKY domain 128 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g2783 296 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 244 IPR044810 GO:0003700
Ahy13g2783 296 SMART WRKY_cls 145 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2783 296 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 244 - -
Ahy13g2783 296 MobiDBLite consensus disorder prediction 224 241 - -
Ahy13g2783 296 SUPERFAMILY WRKY DNA-binding domain 146 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2783 Ahy-Chr13 107803181 107804587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2783 1 228 WRKY Transcription Factor Family AT4G23550 46.025 8.59e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g2783 WRKY 7.60E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2783 K13426 - gmx:102663255 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2783 13 107803181 107804587 Ahy13g2783 13 107803181 107804587 ECH
Ahy13g2783 13 107803181 107804587 Ahy15g3604 15 158766019 158767949 ECH
Ahy13g2783 13 107803181 107804587 Ahy3g2453 3 106177213 106178596 hybridization
Ahy15g1058 15 16231385 16232659 Ahy13g2783 13 107803181 107804587 PCT