Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2772 ATGGCGGAGCATCACGAGCACGAGGAAGGGAAGGGGGAATCGCTGCTGGATAAGATTTCTGGAAAGATCCACGACCACGACGACTCATCGTCTTCCTCCGATTCCGACAACGAGAAGAATAGCACCTCTGAATCCATCAAGAACAAGGTCTTCAGGCTCTTCGGCAGGGAGAAGCCAGTTCACAAGGTCCTTGGTGGTGGAAAACCGGCTGATGTGTTTCTATGGAGAAACAAGAAGATATCTGCAACGGTGCTTGGAGTTGCGACTGCTGTGTGGGTTCTGTTTGAATTGCTTGAATACCATCTCCTCACTTTGGTTTGTCACCTCCTGATTTTTGCACTGGCCGGGTTGTTCTTGTGGTCCAATGCCTCAAATTTCATCAACAAGAGGCCACCTCAGATTCCAAACCTCCATATTCCCGAGGACCCTGTTCTACAATTTGCCTCTGCTCTTAGAATTGAAATTAACACAGCTCTTGATGTATTACGGGATATTGCATCAGGAAGGGATCTCAAGATGTTCCTCACGGTCATTGCTGGATTATGGGTTTTCTCCATTCTGGGAAGCTGTTGCAACTTCTTGACGTTGTTCTACATTGCCTTTGTTTTGCTTCACACTGTTCCTGTGCTCTATGAGAAGTATGAAGACCAGGTGGACTCCTTTGCTGAGAAGGCAACAGCGGAGATTAAGAAGCAGTATGCAGTGTTTGATGCCAAGGTTTTGAGCAAGATTCCCAGAGGACCTTTGAAAGATAAAAAGAAGGATTGA 768 0.4661 MAEHHEHEEGKGESLLDKISGKIHDHDDSSSSSDSDNEKNSTSESIKNKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISATVLGVATAVWVLFELLEYHLLTLVCHLLIFALAGLFLWSNASNFINKRPPQIPNLHIPEDPVLQFASALRIEINTALDVLRDIASGRDLKMFLTVIAGLWVFSILGSCCNFLTLFYIAFVLLHTVPVLYEKYEDQVDSFAEKATAEIKKQYAVFDAKVLSKIPRGPLKDKKKD* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2772 255 PANTHER RETICULON 1 253 IPR045064 GO:0009617
Ahy13g2772 255 Pfam Reticulon 70 225 IPR003388 -
Ahy13g2772 255 ProSiteProfiles Reticulon domain profile. 69 255 IPR003388 -
Ahy13g2772 255 MobiDBLite consensus disorder prediction 21 43 - -
Ahy13g2772 255 PANTHER RETICULON-LIKE PROTEIN 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2772 Ahy-Chr13 106975836 106977994 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2772 - - gmx:100779587 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2772 13 106975836 106977994 Ahy13g2772 13 106975836 106977994 ECH
Ahy13g2772 13 106975836 106977994 Ahy17g2696 17 124530916 124533603 ECH
Ahy13g2772 13 106975836 106977994 Ahy19g3591 19 158518560 158520156 ECH
Ahy13g2772 13 106975836 106977994 Ahy3g2439 3 104896196 104898493 hybridization