Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2771 ATGGAACAGAAAAGCATTCTGCTATCTGCGATCGGTGTTGGGGTTGGAGTGGGAGTGGGACTTGGATTGGCCTCTGGACAAGGAGTTGGAATATGGGGAGCTACCACATATTCCTCAAACGCCATAACCGCTGAGAAGATAGAACAGGAAATGCTACGACAAGTTGTTGATGGAAGAGAAAGCACTGTCACTTTTGATAAATTCCCTTATTATCTCAGTGAGCAGACAAGGGTTTTGCTGACAAGTGCTGCTTATGTCCATTTAAAGCATGCCGAGGTTTCCAAGTATACTCGAAATCTTGCCCCTGCAAGCCAAACTATTCTGCTTTCAGGGCCAGCAGAACTCTATCAACAGATGCTTGCAAAGGCTTTGGCACATTACTTTGAGGCCAAGTTGCTTCTTTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAGATATGGCTTTGGAAATCAAGAATCTTCTTTCAAAAGATCCACCTCAGAGTCGACCTTGGAGCGATTATCAGACCTATTTGGCTCATTTTCAATCTTTCAACAGAGGGAGGAACCTAAAGGTACAATACAAATAAGAAGAAGAGAGGACAGGCTCATAAAAGAGAGCAGAATACATAGGCAGAGCAGCGGAGCGGACCTACAATCAATGGGGACTGAAGCATCTTGCAATCCTCCAAAGCTCCGCAGGAACGCTTCTTCGTCGTCAAATATTAGCACCCTTGGTTTGCAAAGCAATCATACAAATCCAGCTCCTCTGAAACGCACAACTAGCTGGTCTTTTGATGAAAAGCTTCTTATACAGTCTCTTTACAAGGTTCTGGTTTTTGTGTCTAAGACCTACCCTATTGTGCTATATCTGCGTGACGTTGATAAGTTGATATATAGATCACAAAGGATATATAACTTGTTCCAAAAGATGTTGAAGAAACTATCTGGACCAATACTGATTCTTGGTTCACAAGTTCTTGATTCTAGTAATGACTATGAAGAGGTAGATGACCGGCTTAACTCACTCTTCCCGTACACCATAGAAGTCAAGCCCCCAGACGATGAATCTCATCTTGTCAGCTGGAAGTCTCAGTTGGAAGAGGATATGAAGAAGATACAAGTTCAGGATAACAAGAACCATATCATGGAAGTGCTTGCAGCCAATGACCTTGTTTGTGAAGACCTGGATTCAATCTGTGTTGCTGACACAATGGTTCTCAGTAACTACATAGAAGAGATTATTGTCTCGGCGCTTTCTTACCACTTGATGAAAAGCAAAGACCTTGAATACAGAAATGGGAAACTTGTTATTTCTTGCAATAGTTTATCCCATGCCTTGGGTATATTCCACAAGGGAAAACTCATTGGAAAAAACACATCGAAATTGGAAGATCAAGCTGTTAAATCTGAGGTGCCAAAAGGGGAAGAAAGTGTTACAAACCCAGAAGCAAAGTCTGAAGATGCTGCTCCTGTAAAAAAGCCTGGAGCAGAAGCATCAAAGGAAGAAGGGGAAAAATCAGTTGCATCATCAAAAGCTGCTGAAGTTCCTCCGGATAACGAGTTTGAGAAGCGAATAAGACCCGAGGTGATACCAGCAGATGAGATAGATGTGAAGTTCTCTGATATTGGTGCCTTAGAAGAGACGAAAGAATCCCTCCAAGAACTGGTAATGCTTCCTCTTCGAAGGCCAGACCTCTTCACCGGAGGACTTTTGAAGCCTTGCAGAGGAATATTGCTATTTGGACCTCCAGGCACCGGCAAGACAATGCTGGCTAAGGCCATTGCGAAGGAGGCCGGGGCAAGTTTCATCAATGTGTCCATGTCCACCATCACTTCAAAATGGTTTGGCGAAGACGAGAAGAACGTTCGGGCTTTATTCACGCTTGCAGCCAAGGTGTCCCCCACCATTATATTTGTGGATGAGGTCGATAGCATGCTTGGCCAAAGGACTAGAGTTGGGGAGCACGAAGCCATGCGGAAAATCAAGAATGAATTTATGGCACATTGGGATGGCCTTATGACCAAACCAGGGGAGCGCATCCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTCGATGAAGCTATTATTAGGCGATTCGAAAGGAGAATTATGGTGGGGCTGCCATCTGTGGAGAATAGGGAGAAGATTCTGAGGACTTTATTGGCCAAAGAGAAGGTGGATGATGAACTTGACTTTAAGCAACTAGCAACTATGACAGAAGGATACACTGGGAGCGATATAAAGAATCTGTGCACAACTGCTGCATATCGGCCTGTGAGAGAGCTAATTCAGCAAGAGAGGCTCAAGACTCTGGAGCAAAAGCAGAAAGCGGTTACAACACGAGAAGGGAAAGAAGCAAGAGAAGAGAAGCAAGAAAGAGTGATTAGCCTTAGGGCATTGAATATGCAGGACTTGAAGGAGGCAAAGGCTCAGGTTGCTGCAAGCTTTGCGGCGGAGGGGGCTGGAATGAGCGAGTTGAAGCAGTGGAACGAGTTGTACGGAGAAGGCGGCTCAAGAAAGCAGCAGCACTTGACTTACTTTCTCTGA 2538 0.4444 MEQKSILLSAIGVGVGVGVGLGLASGQGVGIWGATTYSSNAITAEKIEQEMLRQVVDGRESTVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASQTILLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSRYGFGNQESSFKRSTSESTLERLSDLFGSFSIFQQREEPKGTIQIRRREDRLIKESRIHRQSSGADLQSMGTEASCNPPKLRRNASSSSNISTLGLQSNHTNPAPLKRTTSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDKLIYRSQRIYNLFQKMLKKLSGPILILGSQVLDSSNDYEEVDDRLNSLFPYTIEVKPPDDESHLVSWKSQLEEDMKKIQVQDNKNHIMEVLAANDLVCEDLDSICVADTMVLSNYIEEIIVSALSYHLMKSKDLEYRNGKLVISCNSLSHALGIFHKGKLIGKNTSKLEDQAVKSEVPKGEESVTNPEAKSEDAAPVKKPGAEASKEEGEKSVASSKAAEVPPDNEFEKRIRPEVIPADEIDVKFSDIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMAHWDGLMTKPGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDDELDFKQLATMTEGYTGSDIKNLCTTAAYRPVRELIQQERLKTLEQKQKAVTTREGKEAREEKQERVISLRALNMQDLKEAKAQVAASFAAEGAGMSELKQWNELYGEGGSRKQQHLTYFL* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2771 845 MobiDBLite consensus disorder prediction 208 248 - -
Ahy13g2771 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 532 772 IPR027417 -
Ahy13g2771 845 CDD AAA 571 704 - -
Ahy13g2771 845 ProSitePatterns AAA-protein family signature. 676 695 IPR003960 GO:0005524|GO:0016887
Ahy13g2771 845 Pfam ATPase family associated with various cellular activities (AAA) 573 703 IPR003959 GO:0005524|GO:0016887
Ahy13g2771 845 MobiDBLite consensus disorder prediction 461 504 - -
Ahy13g2771 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 367 IPR027417 -
Ahy13g2771 845 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 845 - -
Ahy13g2771 845 Gene3D - 532 788 IPR027417 -
Ahy13g2771 845 Pfam AAA+ lid domain 727 767 IPR041569 -
Ahy13g2771 845 MobiDBLite consensus disorder prediction 461 520 - -
Ahy13g2771 845 Gene3D - 705 785 - -
Ahy13g2771 845 SMART AAA_5 569 706 IPR003593 -
Ahy13g2771 845 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2771 Ahy-Chr13 106730662 106735448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2771 533 792 Calmodulin-binding Proteins AT3G56690 36.567 2.23e-43 168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2771 13 106730662 106735448 Ahy13g2771 13 106730662 106735448 ECH