Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2749 ATGGAGTTCCTACGTATTTTGTTATCTTCCATTTGTTTGTTGGTTGTGATTGATCACTGGCAAGGAAATGCTGAACCTGTTGAGGATAAGCAAGCTTTGCTTGATTTTGTGAACAAATTCCCTCCTTCTAGACCTCTGAATTGGGATGAGACCTCCTCCATGTGTGCCAATTGGACCGGAGTCACTTGCAGTGAAGATGAGTCCCGGGTCATCGCCATTCGCCTGCCGGGGGTTGGATTCCATGGCCCAATTCCGCCGGATACTGTTAGCCGCCTCTCGGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGGCGGATACCTTCTGACTTTTCTAATTTGAAGAACTTAACTTTACTGTATCTTCAGTTCAACAATTTCTCTGGTCCTTTGCCTGATTTCTCAGTTTGGAAGAATCTTACTATTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATTCCTGATTCCCTTTCCAATTTGACCGAGCTTGCTGGTTTGAACCTTGCAAACAACTCTCTTTCTGGCGAAATTCCCAATCTCCAGTTGCCAAGACTGCAGCTGCTGAATCTGTCTAACAACAATTTGCATGGGAGTGTGCCTAAATCCCTCCAGAGGTTTCCTGATTCGTCCTTTTTTGGAAATAATATTTCTCTTGGGAGCTCTGCTGTTGTTCCGCCAGTGCCTCCTCCGGTTTATGGGCCTTCTTCAAGGTCTAAGAAGCACGGAAGGCTCAGCGAAACAGCGCTGCTGGGAATTACTATTGCCTGTGGTGTTCTAGGCCTTGTGGCATTTGTTTTCTTGATCTTTGTATGCTGCTCAAGAAGGAGGGGTGAAGATGATGATGCCTTCAGTGGGAAGTTGCACAAGGGTGACATGTCTCCCGAGAAAGCTGTATCGAGGAACCAGGATGCGAATAATAAGCTGTCTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTACTCAGGGCTTCTGCTGAGGTACTGGGAAAGGGAACGTTTGGTACTGCATACAAGGCAATACTGGAAGATGCAACCACGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCAGTTGGAAAGAAGGATTTTGAGCAACACATGGAAATAGTAGGAAACCTTAAACATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAATTAATGGTATATGATTACTATAGCCAGGGTAGTGTCTCGTCAATGTTACACGGTAAAAGAGGAGAGGAAAGAGTGGCTCTAGATTGGGATACTCGGCTGAAAATAGCCCTAGGTGCTGCCAGAGGCATTGCTCGTATCCATGTTGAGAATGGAGGTAAACTCGTGCATGGCAACATCAAATCCTCAAATATCTTCCTCAATACTAAACAGTATGGTTGTGTATCCGACCTTGGTCTCGCATCCATAATGAGCTCACTTGCCTTACCCATCTCACGAGCTGCTGGTTACCGAGCACCTGAAGTTACGGACACCAGGAAAGCGGCACAACCTTCAGATGTTTACAGCTTTGGCGTGGTGTTACTTGAGCTTCTGACAGGGAAATCTCCTATTCACACAACTGGTGGGGATGAGATTATCCACCTGGTGAGATGGGTTCATTCGGTTGTGCGAGAGGAGTGGACAGCCGAGGTGTTTGACTTAGAGCTGATGAGGTATCCAAATATAGAGGAAGAGATGGTGGAAATGCTACAGATAGCAATGTCATGCGTGGTAAGGATGCCCGACCAGAGACCAAAGATGTCTGAAGTTGTGAAGATGATAGAAAATGTGAGGCAAATTGATGCAGAGACTCGGCCGTCTTCCGACAACCAAGCAGAACAGAAATTACCACAACATGACATCGATAATTCCCCTTCTTCCTCTCCCTCACCCTTGCCAAAAGGAAGTGAATGA 1920 0.4562 MEFLRILLSSICLLVVIDHWQGNAEPVEDKQALLDFVNKFPPSRPLNWDETSSMCANWTGVTCSEDESRVIAIRLPGVGFHGPIPPDTVSRLSALQTLSLRSNVITGRIPSDFSNLKNLTLLYLQFNNFSGPLPDFSVWKNLTIVNLSNNHFNGSIPDSLSNLTELAGLNLANNSLSGEIPNLQLPRLQLLNLSNNNLHGSVPKSLQRFPDSSFFGNNISLGSSAVVPPVPPPVYGPSSRSKKHGRLSETALLGITIACGVLGLVAFVFLIFVCCSRRRGEDDDAFSGKLHKGDMSPEKAVSRNQDANNKLSFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAVGKKDFEQHMEIVGNLKHENVVELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVALDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLASIMSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDAETRPSSDNQAEQKLPQHDIDNSPSSSPSPLPKGSE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2749 639 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Ahy13g2749 639 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2749 639 MobiDBLite consensus disorder prediction 602 639 - -
Ahy13g2749 639 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Ahy13g2749 639 SUPERFAMILY L domain-like 39 209 - -
Ahy13g2749 639 Pfam Leucine Rich Repeat 187 208 IPR001611 GO:0005515
Ahy13g2749 639 Pfam Leucine Rich Repeat 141 163 IPR001611 GO:0005515
Ahy13g2749 639 Pfam Leucine rich repeat 84 129 IPR001611 GO:0005515
Ahy13g2749 639 Gene3D Transferase(Phosphotransferase) domain 1 404 624 - -
Ahy13g2749 639 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Ahy13g2749 639 Gene3D Ribonuclease Inhibitor 138 226 IPR032675 -
Ahy13g2749 639 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Ahy13g2749 639 PANTHER PROTEIN, PUTATIVE-RELATED 23 610 - -
Ahy13g2749 639 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2749 639 PANTHER OS05G0588300 PROTEIN 23 610 - -
Ahy13g2749 639 SUPERFAMILY Protein kinase-like (PK-like) 332 596 IPR011009 -
Ahy13g2749 639 MobiDBLite consensus disorder prediction 603 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2749 Ahy-Chr13 104813439 104817344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2749 1 634 Receptor kinase-like Gene Family AT4G23740 65.062 0.0 794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy13g2749 Pkinase 1.00E-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2749 - - adu:107479781 1108.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2749 13 104813439 104817344 Ahy13g2749 13 104813439 104817344 ECH
Ahy13g2749 13 104813439 104817344 Ahy3g2419 3 101990202 101994095 hybridization