Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2727 ATGGCTGCCGGAGAAGTGGTTGTGGCTGCCGGAGCCACACCGGAGCTTCTGGCCGTTTATGCCACTTTAGACCCCGCTGCCGTCGCCGGAAAACGCCTCTGCCGCCGTCGAGATCCAATGCCGGTTGGCATGTGTTTTGGAACCATTGAAGATGCAAATCAATTTTATCAGAATTATGCCAAGCGCATTGGTTTTGTTACTAAGATAAGGTTTACCCGAAGAGTTGGTAAAGATAAGGTTCCTAAGAATCAAATGATCACTTGCAATAGGGAGGGGAAACGCAAGTCTAGAGTTTCACCAATAGAAAAGACCAACCCTAGAACCAACTACAATTGCCCCGCAAGAATTTCTATTAGGTTGAATAAGGAGGGTTTTTAG 378 0.4683 MAAGEVVVAAGATPELLAVYATLDPAAVAGKRLCRRRDPMPVGMCFGTIEDANQFYQNYAKRIGFVTKIRFTRRVGKDKVPKNQMITCNREGKRKSRVSPIEKTNPRTNYNCPARISIRLNKEGF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2727 125 Pfam FAR1 DNA-binding domain 54 124 IPR004330 -
Ahy13g2727 125 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 37 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2727 Ahy-Chr13 102187845 102225608 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2727 FAR1 1.40E-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2727 - - ahf:112735183 253.062