Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2722 ATGGAAAATGATGGGCGCTGGGAGCAGAACATACTCATCAACGAGCTAGTTCAGGGGATGGAGGTAGCAAGAAGGTTGAAGGAAGACATGAATGCGACATATTCAGCAGACACAAAAGATTTGTTGCTGCAGAGGATATTATCTTCGTATGAAAAAGCTCTGCTAATTCTAAGATGGAATGCATCAACTTCCAAGTCTCAGAACATGAGTCAAGCAACAGCAACCTTGTTTTCAGAGTCACCAATATCTATCAGCGCAAGTCCTCTGCGGGATGACAAGGATCATAATCAAGAGTTTAAACACGATTCAAAGAAAAGAAAGACAATGGCCAAATGGGTAGATCAAGTGAGAGTGAGCTTTGAGAGTGGCCTTGAAGGACCACATGAAGATGGTTACAACTGGAGAAAATATGGACAGAAAGATATCCTTGGTGCCAAATATCCCAGAAGTTATTATAGGTGCACCTTCCGGAACACTCAGGGGTGCTGGGCCACGAAGCAAGTACAGAGATCAGACGAAGATCCTACCATATTTGACATAACTTACAAAGGAAGGCATACCTGTTCTCAGGGAAACAAGGCTGTTCCGCAACCGAAATCGCCAGACAAACATGAGAAACTGCAATGTCATAGTAACGAAATTCAGCATAGACAAACATCAGAAGAAAGCCTGACAACTTTCGGGACCATTATGACAGTTAAAAGAGATATGGTGGGAAATGGAGAGATGGAATATCCTTTCACTTTCCCTTCAACTTCATTTGGAAGCATGGCACAAGAAAGCTACAGCTTGATTCCTTCAACCCTGGAGAACGAATCCTTCCTGAGCAGCCATTTCCAAACTCACTTATTATATCCAAACATGCAAGAATTTAAATACCTGCCATCTACGTCTTTCCAGATGAATGAGCTTGATGGGATCTATAATAGGCCGCTTTCAGAATCAGATATTACTGAGATCATTTCCACCAACACATCCACCACCAATTCTCCAGTTCCGGAGTTCAATTTCTCACTTGATCCAGTGGAAATTGATCCAAATTTCCCTCCCAATACCCTGGATTTTTCTCCTAGAGCCCTTATCAACAAGAACATCTAG 1098 0.4235 MENDGRWEQNILINELVQGMEVARRLKEDMNATYSADTKDLLLQRILSSYEKALLILRWNASTSKSQNMSQATATLFSESPISISASPLRDDKDHNQEFKHDSKKRKTMAKWVDQVRVSFESGLEGPHEDGYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTIFDITYKGRHTCSQGNKAVPQPKSPDKHEKLQCHSNEIQHRQTSEESLTTFGTIMTVKRDMVGNGEMEYPFTFPSTSFGSMAQESYSLIPSTLENESFLSSHFQTHLLYPNMQEFKYLPSTSFQMNELDGIYNRPLSESDITEIISTNTSTTNSPVPEFNFSLDPVEIDPNFPPNTLDFSPRALINKNI* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2722 365 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 352 IPR044810 GO:0003700
Ahy13g2722 365 SMART WRKY_cls 128 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2722 365 Pfam WRKY DNA -binding domain 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2722 365 SUPERFAMILY WRKY DNA-binding domain 127 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g2722 365 Gene3D WRKY domain 114 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy13g2722 365 ProSiteProfiles WRKY domain profile. 123 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy13g2722 365 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2722 Ahy-Chr13 101857193 101859191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2722 7 349 WRKY Transcription Factor Family AT4G11070 35.795 1.21e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy13g2722 WRKY 8.70E-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2722 - - adu:107480050 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2722 13 101857193 101859191 Ahy3g2406 3 100847753 100849627 hybridization
Ahy5g1539 5 40950324 40952222 Ahy13g2722 13 101857193 101859191 PCT