Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy13g2674 | ATGGAGGACGCGGAAACGAAAGAGAGGATTGAGGAAACGGTGCGGACGATTCTAGAAGGATCCAACATGGATGAGATGACAGAGTCGAAGATTCGGAAGCAGGCTTCCACCCATCTCGGCCTCGACCTCTCCCAGCCGCCCCTCAAAGCCTTCGTCAAACAGGTCGTTCAAGCATTCCTCGACGAGAAGCAGCGCCAACCTGAACCTGAAGAAGATCACAACAAGCCGGAGTACGATGACGACGGCGATCTCATCATCTGCAAGCTCTCTGAGAGGAGAAGGGTCACCGTTCAGGACTTCCGAGGCAAAACTTTGGTCTCCATTCGCGAGTATTATCGAAAGGACGGCAAGGAACTCCCTACCTCTAAAGGAATAAGTTTGACAGAGGAGCAATGGTCAGCCTTCAAGAAAAATGTGCCTGCTATAGAAAAGGCCATTAAGAAAATGCAGTCCGGCAACATATAA | 465 | 0.5054 | MEDAETKERIEETVRTILEGSNMDEMTESKIRKQASTHLGLDLSQPPLKAFVKQVVQAFLDEKQRQPEPEEDHNKPEYDDDGDLIICKLSERRRVTVQDFRGKTLVSIREYYRKDGKELPTSKGISLTEEQWSAFKKNVPAIEKAIKKMQSGNI* | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy13g2674 | 154 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP | 4 | 151 | - | - | |
Ahy13g2674 | 154 | MobiDBLite | consensus disorder prediction | 63 | 81 | - | - | |
Ahy13g2674 | 154 | MobiDBLite | consensus disorder prediction | 61 | 81 | - | - | |
Ahy13g2674 | 154 | Pfam | DEK C terminal domain | 5 | 60 | IPR014876 | - | |
Ahy13g2674 | 154 | SUPERFAMILY | DEK C-terminal domain | 4 | 61 | - | - | |
Ahy13g2674 | 154 | Pfam | Transcriptional Coactivator p15 (PC4) | 87 | 138 | IPR003173 | GO:0003677|GO:0006355 | |
Ahy13g2674 | 154 | Gene3D | - | 1 | 63 | - | - | |
Ahy13g2674 | 154 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 76 | 152 | IPR009044 | GO:0003677|GO:0006355 | |
Ahy13g2674 | 154 | PANTHER | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR | 4 | 151 | IPR045125 | GO:0003713|GO:0060261 | |
Ahy13g2674 | 154 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 86 | 149 | IPR009044 | GO:0003677|GO:0006355 | |
Ahy13g2674 | 154 | PIRSF | RNA_polymII_KELP | 1 | 153 | IPR017415 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy13g2674 | Ahy-Chr13 | 97737455 | 97738866 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Coactivator p15 | Ahy13g2674 | DEK_C | 8.90E-15 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy13g2674 | K25815 | - | gmx:100499671 | 233.802 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy13g2674 | 13 | 97737455 | 97738866 | Ahy13g2674 | 13 | 97737455 | 97738866 | ECH | |
Ahy13g2674 | 13 | 97737455 | 97738866 | Ahy3g2353 | 3 | 94061986 | 94063833 | hybridization |