Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2650 ATGGAAGGGGATGAAGACCAATTCTATGATACCCGTGAGGATTTATGTTCTGGTTCTGATGGTTGTTCTAGTTTATCAGAATCAGATGAATCTAGTTCTTGGGATGGACATTTTACTAGGTTCCCGGATTGGACAAACAACCACCACCTTGAAAGTGTTCACCAGAGACGGCTCAATTTCCTAAGATGGGTGGGTTTAGAATCTGATTGTGATGTGAATTCAGTCATGGGAAAGGACGACTTGGCTGATCCATCCTCTCGTGGAGTTGACCGAGTCACGGCCACCAGTGGGGCTGTGCTAAGAACTTCTGGTTTTGCAGAGAGTGCTCTTGCCTCTACCTCAAACCAGATTGTATTGGATTCTTTGTCCAGTGCGAATTTGAGCTCACTAGAAAATTCCGGGGGTGATGAGAATTTGGCATGTATGATAAAGAATTTGGATGATGGGACACAGTACATTATGGATAAATTGGATCAAGATGGAACACCTAATACACTGCGTGTTGTCGGGTCTAACCAATTGATTAGCTTGGAAGAGTTTCACAGAAATATTGGGCAGTCACCTTTGGTTCGGAGATATTTGCAGAGGGAGGCTGAGAACTCAAGATTTTTGGCTGCTAGAAAAAAGAGAGCGAAGAGGGGTTGGCTAAGGAAGTTGGGTGTTGTGGCTTGTGTTGTTCATGATCACGGGCTTCATGAAATGAAGAACAAAGACTTTGATTCCTCAGATGTAACTGGGATCCAAAGAGTTCGAGTTCATACACACGGGAAGCGATTTAAGGAGCTCTCCTCTGTTTACACTGAGCAGGAGTTTAAAGCACATAAGGGTATTATTTTGACAATGAAGTTCAGCCTTGATGGAAAATATTTGGCTAGCGGTGGTGAAGATGGCGTTGTACGTGTGTGGAAGGTGGTTGAGGATGAAAGATCGAGTGAACTGCACATTTTGGACAATGATCCCTCAAGTATATACTTCAAAATGAACACTTATTCATTTGTAACTCCCCTTGATGTAGATAAAGAAAAATTAGTTACAACAGAGAAGTTGAGGAGATCATCTGATTCAACCTGTGTGATTATCCCACCAAAGACCTTCCGAATATCAGGGAAACCTCTGCACGAGTTCCATGGCCACAGTGGTGACATTTTAGACCTTGCATGGTCGAAGAGAGGGTTGCTACTGTCATCCTCTGTTGATAAGACAGTCCGCCTATGGCAAGTTGGAACAGACAGCTGCCTCGGTGTTTTTTCCCACAATAATTATGTTACATGTGTGCATTTCAATCCCATAAATGACAACATCTTCATCAGTGGTTCGATTGATGGTAAAGTGCGTATCTGGGAAGTTCTTCGTTGCCGGGTTATTGATTACATTGATATCAGAGAGATAGTCACTGCTGTGTGCTTCCGCCCTGATGGAAAGGGCACAATTATGGGTACTATGGCAGGCAATTGCCGTTTCTATGATATAATAGATGATCATATGCAATTGAATGCTCAATTAAACTTATGGGGCAAAAAGAAGACAGCAGGAAAGAGGATTACTGGCTTTCAGTTTTCGCCAATCGACACAAGCCAATTGTTGGTTGCTTCTGCTGATTCACACGTCTGTATACTTTCCGGAGTTGATGTCATCTACAAATTTAAGGGCCTAAAAAGTGCTGGTCAGATGCATGCTTCCTTCACATTGGACGGGAAACACATTGTTTCAGTAAGTGAGGATTCAAATGTGTGTGTCTGGAATTACAATGGCCATGACAGGAATACTTCCAAGGCGAAGAAGGTTTGGTCTTCCGAGTGTTTTCTGTCCCACAACGCAGCAATTGCCATACCTTGGTGCGGCATGGAACAAATGCCAGGAACACTCTTGTCCCCGTCATTGAGGGACGATTTCAATCACAAGTCATTCCTCTCTTCCCCGGATTGCTTCTTCTTGGGCCGTGGATTTTTGTCAGAGTTAGTCCCAAAGGTTTCTCCAACTTGGCCCGAGGAGGCACTCGCGGATCCGTGCCAAACCATAGTGTCGCCTAAGATGTACAAATCCGAGTACAAGTTCTTGAGAAGTGCTTGCAAGGGAATGTCGAATTCTCACATGTGGGGCCAAGTAATTGTAACAGCAGGATGGGATGGACACATAAGGGTGTACCAGAACTATGGCCTACCAATTCGTGTTTGA 2175 0.4405 MEGDEDQFYDTREDLCSGSDGCSSLSESDESSSWDGHFTRFPDWTNNHHLESVHQRRLNFLRWVGLESDCDVNSVMGKDDLADPSSRGVDRVTATSGAVLRTSGFAESALASTSNQIVLDSLSSANLSSLENSGGDENLACMIKNLDDGTQYIMDKLDQDGTPNTLRVVGSNQLISLEEFHRNIGQSPLVRRYLQREAENSRFLAARKKRAKRGWLRKLGVVACVVHDHGLHEMKNKDFDSSDVTGIQRVRVHTHGKRFKELSSVYTEQEFKAHKGIILTMKFSLDGKYLASGGEDGVVRVWKVVEDERSSELHILDNDPSSIYFKMNTYSFVTPLDVDKEKLVTTEKLRRSSDSTCVIIPPKTFRISGKPLHEFHGHSGDILDLAWSKRGLLLSSSVDKTVRLWQVGTDSCLGVFSHNNYVTCVHFNPINDNIFISGSIDGKVRIWEVLRCRVIDYIDIREIVTAVCFRPDGKGTIMGTMAGNCRFYDIIDDHMQLNAQLNLWGKKKTAGKRITGFQFSPIDTSQLLVASADSHVCILSGVDVIYKFKGLKSAGQMHASFTLDGKHIVSVSEDSNVCVWNYNGHDRNTSKAKKVWSSECFLSHNAAIAIPWCGMEQMPGTLLSPSLRDDFNHKSFLSSPDCFFLGRGFLSELVPKVSPTWPEEALADPCQTIVSPKMYKSEYKFLRSACKGMSNSHMWGQVIVTAGWDGHIRVYQNYGLPIRV* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2650 724 PRINTS G protein beta WD-40 repeat signature 290 304 IPR020472 -
Ahy13g2650 724 PRINTS G protein beta WD-40 repeat signature 393 407 IPR020472 -
Ahy13g2650 724 PRINTS G protein beta WD-40 repeat signature 435 449 IPR020472 -
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 271 304 - -
Ahy13g2650 724 Gene3D - 263 499 IPR015943 GO:0005515
Ahy13g2650 724 SMART WD40_4 450 489 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 368 406 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 264 303 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 541 581 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 676 716 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 496 540 IPR001680 GO:0005515
Ahy13g2650 724 SMART WD40_4 409 448 IPR001680 GO:0005515
Ahy13g2650 724 MobiDBLite consensus disorder prediction 17 32 - -
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 375 407 - -
Ahy13g2650 724 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 3 724 - -
Ahy13g2650 724 MobiDBLite consensus disorder prediction 1 33 - -
Ahy13g2650 724 Pfam WD domain, G-beta repeat 369 405 IPR001680 GO:0005515
Ahy13g2650 724 Pfam WD domain, G-beta repeat 411 447 IPR001680 GO:0005515
Ahy13g2650 724 Pfam WD domain, G-beta repeat 269 303 IPR001680 GO:0005515
Ahy13g2650 724 PANTHER WD REPEAT DOMAIN 44 3 724 IPR040324 -
Ahy13g2650 724 SUPERFAMILY WD40 repeat-like 266 715 IPR036322 GO:0005515
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 415 449 - -
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 375 415 IPR001680 GO:0005515
Ahy13g2650 724 Gene3D - 500 718 IPR015943 GO:0005515
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 415 449 IPR001680 GO:0005515
Ahy13g2650 724 ProSiteProfiles Trp-Asp (WD) repeats profile. 271 312 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2650 Ahy-Chr13 93543791 93547555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2650 265 479 Miscellaneous Gene Families AT5G08390 24.066 5.93e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2650 - - ahf:112790741 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2650 13 93543791 93547555 Ahy13g2650 13 93543791 93547555 ECH
Ahy13g2650 13 93543791 93547555 Ahy17g2558 17 121157028 121161745 ECH
Ahy13g2650 13 93543791 93547555 Ahy16g2937 16 143923753 143928773 ECH