Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2647 ATGGTTGAGAACTGTGATGATGAGTTTCTAAAGTTTGATCTGGAATACCAACAGGATGTGACAGCAACTAAAAGAAATAAATTTGAGGATTATTTTTTGAAGCGACGAGAGTTGCTCATGGGAATATATGAGAAGGATTTTGAAAGGCCTTCTCCTATCCAAGAAGAAAGCATTCCAATTGCTCTTACTGGTAGTGACATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTGCATTCCTGCATTGGAAAAAATTGACCAGAAACAATCTATCCTGGCAAAGTTCAAATTGTATTGCTCTCACGCCTGTGGAACAATTTTGTTAATAGTGTCTACTTAG 351 0.3789 MVENCDDEFLKFDLEYQQDVTATKRNKFEDYFLKRRELLMGIYEKDFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQKQSILAKFKLYCSHACGTILLIVST* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2647 116 Gene3D - 4 115 IPR027417 -
Ahy13g2647 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 94 IPR027417 -
Ahy13g2647 116 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6 16 97 - -
Ahy13g2647 116 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 16 97 - -
Ahy13g2647 116 Pfam DEAD/DEAH box helicase 52 91 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2647 Ahy-Chr13 93403800 93405668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2647 28 90 Eukaryotic Initiation Factors Gene Family AT5G11200 46.032 2.15e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2647 K12614 - ahf:112735966 234.958