Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2610 ATGAGCAGCAAAAAGGGAAGTTATGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGTGAGTGGGAAAGTAGTAGTTGTTGCAGTTAAAGCTTCAAGAGAAATTTCAAGAACTGCTTTGGTTTGGGCATTGACTCATGTTGTTCAACCAGGGGATTCCATTAAGCTGTTAGTTGTCATTCCTTTTCTCTCCTCAGGCAAGAGGAATTGGGGATTCTCAAGATTTACCAGTGATTGTACCACTAGTAACTGGAGATCCCACTTAGGAAGCGCTTCAGATCAGAAAGAAATTATTACAAGTTCCTGTTCCCAATTGGTGCTTCAACTCCATGATTTATATGATCCAGACAAGATAAAGATCAGAGTTAAGATTCTTTCGAGTTCTTTATGTGGAGCAGTTGCCATTGAAGCCAAGAGAGTCCACTCAAGCTGGGTTATATTGGACAAAAAATTGAAACAAGAAAAGAAGTGCTGCATGGAGCAGCTGCATTGCAATATTGTAAGTATGAAGCGATCAAGGGCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCGAAGATGGAACTTAATGATGGGGGGTGTTCATTGTCATTGGAGCTGAGTGCATATGCAAAACAAAATCCAGACACAATTAGAGGTCCTGCTGTTACTCCAGCTAGTAGTCCTGAGCAAGGATCGCCGCTATTGACTGCAACTGATATTGGTACCTCATCACTATCGAGCTCAGATCCTAGCACTTCACCATTTTTCCAGAGTGATATTTATGAAAGGCGAAGGCACGAGGGACTGAAAAATCTGGAGTATATTGAATCTGACTCGGAGAGTGAAAAGCTAAGTTTATCTTCAAAAAGTTCATATATTCAGCCCTGGATTGCCAATGTGATTTGTGTTGATGGTGAGGACAGTATGCAAAGGTTCGGCGATCAAGACCCTGTCTTAGGAGTGCTTAATTGTAAGATTGATGTCAACCTAAGCAAAAGTGTTAGAGATGCAATTTCGCTTGCGAGAAATGCACCTCCTGGTCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCTGCATTTGGAAACCCTCCAAGGTGGTTTACCTTTTCCGAATTGCAACTCGCCACGGGTGGTTTTTCACAAGAAAATTTCTTGGCACAAGGTGGTTTTGGTTCTGTACACCGCGGCGTGCTACCGGATGGGCAAGTCATTGCTGTGAAGCAGTATAAATTAGCCAGCACACAAGGTGATAAAGAATTTTGCTCAGAAGTTGAAGTCTTAAGCTGCGCACAACATCGGAATGTTGTGACGCTAATTGGGTTTTGTGTGGAGGATGGTAGAAGATTACTAGTTTATGAATACATATGCAATGGCTCTTTGGATTCTCATCTTTATGGACGAAAACAGAAAGTACTAGAATGGTCTGCTCGGCAAAAAATCGCAGTGGGAGCTGCTCGCGGCTTAAGGTACCTACATGAAGAATGCAGAGTGGGATGTATTGTGCACCGTGATATGCGACCTAACAATATCCTCGTTACTCATGATTTTGAAGCACAGGTGGGAGATTTTGGACTTGCTAGGTGGCAACCTGATGGAGATTTGGGTGTGGAAACCAGGGTCATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGGCAAATAACAGAGAAAGCTGATGTGTATTCATTTGGAATAGTGCTATTGGAGCTTGTAACAGGAAGGAAAGCCATTGATATAAACCGCCCCAAAGGCCAGCAATGCCTCAGTGAATGGGCACGGCCATTGCTTGAACTTAAACATGAAGAAGCAGAAGCGAGAGAAGAGCTAGTTGATCCTATAATATGGAAAGGGAAAGGGTATATTGCTAAAGAGGTTAATCGAATGTTGCAATGTTGCTCCTTGTGCATCCGAAGAGACCCTCATTCAAGGCCCAGAATGTCTCAGGTGCTAAGGATGCTGGAAGAATGA 1977 0.4299 MSSKKGSYEEVEEEEEEEEEEEMVSGKVVVVAVKASREISRTALVWALTHVVQPGDSIKLLVVIPFLSSGKRNWGFSRFTSDCTTSNWRSHLGSASDQKEIITSSCSQLVLQLHDLYDPDKIKIRVKILSSSLCGAVAIEAKRVHSSWVILDKKLKQEKKCCMEQLHCNIVSMKRSRAKILRLNLNSSPKMELNDGGCSLSLELSAYAKQNPDTIRGPAVTPASSPEQGSPLLTATDIGTSSLSSSDPSTSPFFQSDIYERRRHEGLKNLEYIESDSESEKLSLSSKSSYIQPWIANVICVDGEDSMQRFGDQDPVLGVLNCKIDVNLSKSVRDAISLARNAPPGPPPLCSICQHKAPAFGNPPRWFTFSELQLATGGFSQENFLAQGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVTLIGFCVEDGRRLLVYEYICNGSLDSHLYGRKQKVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEAQVGDFGLARWQPDGDLGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAIDINRPKGQQCLSEWARPLLELKHEEAEAREELVDPIIWKGKGYIAKEVNRMLQCCSLCIRRDPHSRPRMSQVLRMLEE* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2610 658 CDD STKc_IRAK 385 658 - -
Ahy13g2610 658 MobiDBLite consensus disorder prediction 213 251 - -
Ahy13g2610 658 Pfam Protein kinase domain 381 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2610 658 ProSiteProfiles Protein kinase domain profile. 379 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy13g2610 658 PANTHER OS01G0253100 PROTEIN 24 307 IPR045271 GO:0004714|GO:0006468
Ahy13g2610 658 MobiDBLite consensus disorder prediction 1 22 - -
Ahy13g2610 658 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 24 307 - -
Ahy13g2610 658 Coils Coil 1 21 - -
Ahy13g2610 658 Gene3D Phosphorylase Kinase; domain 1 351 454 - -
Ahy13g2610 658 ProSitePatterns Tyrosine protein kinases specific active-site signature. 500 512 IPR008266 GO:0004672|GO:0006468
Ahy13g2610 658 Gene3D Transferase(Phosphotransferase) domain 1 455 658 - -
Ahy13g2610 658 PANTHER OS01G0253100 PROTEIN 311 657 IPR045271 GO:0004714|GO:0006468
Ahy13g2610 658 SUPERFAMILY Protein kinase-like (PK-like) 360 656 IPR011009 -
Ahy13g2610 658 MobiDBLite consensus disorder prediction 217 251 - -
Ahy13g2610 658 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 311 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2610 Ahy-Chr13 89680164 89683392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2610 341 652 Trihelix Transcription Factor Family AT1G68690 50.321 3.74e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Ahy13g2610 Pkinase 6.20E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2610 - - aprc:113855006 1014.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2610 13 89680164 89683392 Ahy13g2610 13 89680164 89683392 ECH
Ahy13g2610 13 89680164 89683392 Ahy3g2282 3 82346349 82349603 hybridization