Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2608 ATGGATCCATCAATTTGTGAAGAAGCGTCATACGGCACTATATATGATGTGAGTGATCATTCTAATTTCACCGACGTTAATGTTCCGTCTCTGAGTGAAGATGACACACCACTTATGGACAAGGGGGAAGAATCTGTAGACGTTATTCAATTAGAGGATGATGCTACGACAATTAATCATGAGTTGCCAGATCACATTGGAATTCCAATAGAGGAAATCCCGTACGAAGGATTGAGATTTGATTTGGTGCAGAGGGCACAAGAGTTCTATTGTAATTATGCAAAGAAAGTTGGGTTTGTGACTAGGATTAGGAATACCAACTTTGACAAGACGAGGAAGGAATCAAAGATACCCATTAACCAATCGATACACTGTAGTCGTGAAGGTTATCGGGAGTCTCGAGTGAAGGCAGCAACTCGGATAAAGAGAATAACAACAGCCGGCTGCAAATCAAGGATGTACGTGATGCTTGATAGGCAGAAGGATAATTGGATGGTGTCCAAATTAGAATTGAAGCACACGCACCTGTATTTTGCCAAGCAATCCGTGCATTACACTGAGTATAGAAAACTAACCATGCATACCAAGTGTGTGATTCAGAACAATGATGAGGCTGACATATGGCCCAACAAGACTTATCTAAGACTGGCGAATGAGGTTGATGGGTCATCGAAGTTGGGTTACTCAGAAAAGGATGTAAGGAACTACATAACGAGCAATCTGCATTGTGTTGACGAAAACGCAGATGGGAAGGAAATGATTAGCTATTTCATGGCATCCTATGAATATTTTGGAGACGTGGTATCATTTGATACAACGTACTGTAGAAACAAGCATGGACTTCCGTTTGCATGTTTTGTTGGTGTCAACCATCACGGAAAGTTTACTTTGCTCGGATGTGCTTTGTTGCGAAATGAGGAAATTCGTAGCTTTGAGTGGGTCTTTAAACAATGGTTGAAGTGCATGGGAACTCCTTCCAAATACTCGACATCGATGGTGGATATGGCACATAATGAAGAAGATACCGCATAA 1032 0.4138 MDPSICEEASYGTIYDVSDHSNFTDVNVPSLSEDDTPLMDKGEESVDVIQLEDDATTINHELPDHIGIPIEEIPYEGLRFDLVQRAQEFYCNYAKKVGFVTRIRNTNFDKTRKESKIPINQSIHCSREGYRESRVKAATRIKRITTAGCKSRMYVMLDRQKDNWMVSKLELKHTHLYFAKQSVHYTEYRKLTMHTKCVIQNNDEADIWPNKTYLRLANEVDGSSKLGYSEKDVRNYITSNLHCVDENADGKEMISYFMASYEYFGDVVSFDTTYCRNKHGLPFACFVGVNHHGKFTLLGCALLRNEEIRSFEWVFKQWLKCMGTPSKYSTSMVDMAHNEEDTA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2608 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 259 324 - -
Ahy13g2608 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 71 255 - -
Ahy13g2608 343 Pfam FAR1 DNA-binding domain 88 175 IPR004330 -
Ahy13g2608 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 71 255 IPR031052 GO:0006355
Ahy13g2608 343 Pfam MULE transposase domain 267 336 IPR018289 -
Ahy13g2608 343 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 259 324 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2608 Ahy-Chr13 89638966 89640686 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2608 FAR1 1.40E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2608 - - ahf:114927550 499.975