Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2587 ATGGATAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAAATATAATTAATACTAATGGTTTTGAAAAGTTGATAACTGATTTTACCATCGAAGATATATGGAGATTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCAAAAAGACTTGAAGACGGTGGATGCTAATGGTAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGATATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGCTAGGATTCGGTTCATTCGTCACTATAAAACGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCCGCGAATCGTGGGCTTATTGAGGCTGATAAAACACAAACAGACAACTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTTCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGAAAAGACTTACATAACCACATTAGTAAGACTAGGCATGACAAAGTGAAAGACAGTGATGCATTTGTTGCGTTGGCCTATCTGTTTTCTAAGGTAGACAGTGACCCGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGGTTGGATAATTTGGTGTGGGCTGATGGAGAAAGCGTTGTTGACTACGAATGTTTTGGCGATGTACTGGCTTTTGACGCCACTTACAAGAAAAATGTATACAACAAGCCCTTAGTCATATTTTCAGGGACCAACCACCATGGCCAGACAACTATCTTTGGATGCGCTCTGCTCTCAGATAAAAGGTCCGAAACTTTCAAGTGGGCACTGAAAGAATTTTTGGAAATCATGTCAGAAAAACTACCCGGAGGCGTTGTGACAGACGGAGACCGTGCTATGAGAGAGGCTATCTTAGAAGTATTTCCTGGTATACCACACCGCCTTTTTGCATGGCATCTCTATCGTAATGCGAGATGGAACGAGATCATATCCAAATACGGACTTGTCGAGAATGAATGGGTCTGGGCATTTATAATGACAGAATAA 1218 0.4072 MDNDGKESYKDGDQSEDLSVEYECSSDESDDMVDVTVDEAEANIINTNGFEKLITDFTIEDIWRLVFDTESQVCEFYAKYAKCYGFVSQKDLKTVDANGNINTRQLVCNKAGERYWKHLKRDNRQREHRAITRVNCRARIRFIRHYKTGKWKVSVFESEHNHPLCPPKYRHLIAANRGLIEADKTQTDNLRACGVKTCHIMGYMVFQKGGYDKVGFTRKDLHNHISKTRHDKVKDSDAFVALAYLFSKVDSDPLFLGKFTLKDGRLDNLVWADGESVVDYECFGDVLAFDATYKKNVYNKPLVIFSGTNHHGQTTIFGCALLSDKRSETFKWALKEFLEIMSEKLPGGVVTDGDRAMREAILEVFPGIPHRLFAWHLYRNARWNEIISKYGLVENEWVWAFIMTE* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2587 405 MobiDBLite consensus disorder prediction 1 17 - -
Ahy13g2587 405 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Ahy13g2587 405 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 381 IPR031052 GO:0006355
Ahy13g2587 405 Pfam MULE transposase domain 286 380 IPR018289 -
Ahy13g2587 405 MobiDBLite consensus disorder prediction 1 21 - -
Ahy13g2587 405 PANTHER OS02G0262500 PROTEIN 61 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2587 Ahy-Chr13 87692148 87693449 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy13g2587 MULE 3.40E-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2587 - - aip:110269479 845.499