Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2538 ATGTTGACGCTGAAGGGAGGAACAAGGCCGCCATGGGTGAGCCTAGGAGCCTCTGTGTGGGTCCAAATAGCCTCCGGGAACACGTTCACGTTCCCTCTCTACTCCCACTCGCTGAAATCGGTTCTTGGATTCAACCAGCGTCAGCTCACATTGCTCGGTGTGGCCAACGACATCGGCGAGAATGTCGGCTTGCTCCCTGGCCTCGCCTGCAACAAGTTCCCGCCTTGGGCCATCCTCCTCGTTGGTTCTCTCGCCTCCTTCCTCGGTTACGGACTGATCTGGCTCGCCCTTAGTCAAACCCTTAAATCCCTCCCTTACTTGCTGCTATGGTCTGCCCTCGTTATTGCTGCCAACAGCAGTGCATGGTTAACCACATCCGTGCTTGTAACCAACATGAGAAACTTCCCAGTTAGCAGAGGCAAGGTTTCTGGAATTTTGAAAGGCTACGGAGGGCTTAGTGCTGCAGTTTTTACTGAAATTTACAGCATAGTGCTTCATAATTCTTCCTCGCACTTTGTGTTGTTCCTTGCCATTGGTATTCTTGTTGTGTGCTGCATTATGATGTTTCTTGTTAGGCCTTGTACCCCGGCTTCTGTTGAAGATGCCACAGACAATTGGCATTTTCTATTTATCCAGTGTTCTAGTGTGGTCTTGGGTTTATATCTTCTCGCAACTACAATTTTCGGTAACATTATTTCATTTAGTGGTACACTTTCTTATATTCTGGTGGCTGTGATGGTTCTTCTTCTGATGGCTCCACTTGCAATCCCTTTAAAGATGACGATATGTCCAAGGAGAGAATCTGATTCAGACTCACCTGATCGACAAGTTGGATCCTCCGACTCTATCACTGGAAATGATGGAAAAACAGAACCACTGCTAGCATCCTCATCTGCTGGAACCCTTGGAAGTTTTTATGATCAAGATGATTCATCTGAGGTGGCCATGCTTCTTGCTTTGGGTGAGGGAGCTGTAAAGCAGAAGAAGAGAAAGCCTAAACGTGGGGAAGATTTTAAGTTTACTGAGGCTGTAATAAAGGCTGATTTCTGGCTACTATTTTTCGTGTTCTTTGTTGGTGTTGGCACTGGGGTAACTGTTCTGAATAATCTGGCCCAAATAGGTATTGCACAAGGTGAGGAAGATACCACAACCTTATTGTCAATTTTCAGCTTTTGTAATTTCGTTGGACGGCTTGGTGGGGGAGTTGTTTCAGAACATTTTGTCAGGACAAAAACAATCCCAAGGACAGCCTGGCTGACATTCACACAGATAATTATGCTCGTTGTATACCTGCTGTTTGCCTATGCTGTCAACGGAACCCTTTATCCTGTCGTTGCCCTTCTTGGTGTCTGCTATGGTGTGCAAGTTTCTGTGATGATCCCCACAGTTTCCGAGCTTTTCGGTTTGAAGCACTTCGGGGTATTGGGTAATGTCATGTCACTAGGAAATCCACTCGGAGCATTCCTTTTCTCAGCCCTTCTTGCAGGGTATGTATATGATACCGAAACGGCAAGGCAGGAAGCTCTGGGCCTCATTGCTTCCGGTGCCTCATGTTTGGGTCCAAATTGCTTCCAGTTGACCTTTTTCGTTCTTTCGGGTGTATGTGCCGCTGGCATCATCTTGAGCATTATTCTGACTTGGAGAATCAAGCCGGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAGGCTGCCTCAAACTTCTTCAAGTCACTGA 1716 0.4674 MLTLKGGTRPPWVSLGASVWVQIASGNTFTFPLYSHSLKSVLGFNQRQLTLLGVANDIGENVGLLPGLACNKFPPWAILLVGSLASFLGYGLIWLALSQTLKSLPYLLLWSALVIAANSSAWLTTSVLVTNMRNFPVSRGKVSGILKGYGGLSAAVFTEIYSIVLHNSSSHFVLFLAIGILVVCCIMMFLVRPCTPASVEDATDNWHFLFIQCSSVVLGLYLLATTIFGNIISFSGTLSYILVAVMVLLLMAPLAIPLKMTICPRRESDSDSPDRQVGSSDSITGNDGKTEPLLASSSAGTLGSFYDQDDSSEVAMLLALGEGAVKQKKRKPKRGEDFKFTEAVIKADFWLLFFVFFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKTIPRTAWLTFTQIIMLVVYLLFAYAVNGTLYPVVALLGVCYGVQVSVMIPTVSELFGLKHFGVLGNVMSLGNPLGAFLFSALLAGYVYDTETARQEALGLIASGASCLGPNCFQLTFFVLSGVCAAGIILSIILTWRIKPVYQMLYAGGSFRLPQTSSSH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2538 571 MobiDBLite consensus disorder prediction 275 292 - -
Ahy13g2538 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 571 - -
Ahy13g2538 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 571 - -
Ahy13g2538 571 Pfam Nodulin-like 11 258 IPR010658 -
Ahy13g2538 571 Gene3D MFS general substrate transporter like domains 11 204 IPR036259 -
Ahy13g2538 571 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Ahy13g2538 571 CDD MFS_Mch1p_like 10 539 - -
Ahy13g2538 571 MobiDBLite consensus disorder prediction 266 292 - -
Ahy13g2538 571 SUPERFAMILY MFS general substrate transporter 222 551 IPR036259 -
Ahy13g2538 571 Gene3D MFS general substrate transporter like domains 344 552 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2538 Ahy-Chr13 76563829 76567394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g2538 2 571 Nodulin-like Gene Family AT1G80530 53.846 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2538 - - gmx:100794012 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2839 11 145959528 145961956 Ahy13g2538 13 76563829 76567394 PCT
Ahy1g2120 1 98319347 98321828 Ahy13g2538 13 76563829 76567394 PCT
Ahy13g2538 13 76563829 76567394 Ahy11g2839 11 145959528 145961956 PCT
Ahy13g2538 13 76563829 76567394 Ahy1g2120 1 98319347 98321828 PCT